RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 PNISRQ8TF01 805 aaKnown RBP23.12■■□□□ 1.29
DDR1-235ENST00000428153 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 VEGFAP15692 232 aaPredicted RBP23.11■■□□□ 1.29
DDR1-235ENST00000428153 DCTN1Q14203 1278 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 IFFO2Q5TF58 517 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 SMC1BQ8NDV3 1235 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 MASTLQ96GX5 879 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 CCDC88AQ3V6T2 1871 aa23.11■■□□□ 1.29
DDR1-235ENST00000428153 ARFGEF2Q9Y6D5 1785 aa23.1■■□□□ 1.29
DDR1-235ENST00000428153 PNNQ9H307 717 aaKnown RBP23.1■■□□□ 1.29
DDR1-235ENST00000428153 DICER1Q9UPY3 1922 aaKnown RBP23.1■■□□□ 1.29
DDR1-235ENST00000428153 NBPF26B4DH59 902 aa23.09■■□□□ 1.29
DDR1-235ENST00000428153 C21orf2O43822 256 aa23.09■■□□□ 1.29
DDR1-235ENST00000428153 DPY19L2Q6NUT2 758 aa23.09■■□□□ 1.29
DDR1-235ENST00000428153 NBPF10Q6P3W6 841 aaKnown RBP23.09■■□□□ 1.29
DDR1-235ENST00000428153 NBPF15Q8N660 670 aa23.09■■□□□ 1.29
DDR1-235ENST00000428153 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
DDR1-235ENST00000428153 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
DDR1-235ENST00000428153 PLEKHF1Q96S99 279 aa23.08■■□□□ 1.29
DDR1-235ENST00000428153 LAMB4A4D0S4 1761 aa23.08■■□□□ 1.29
DDR1-235ENST00000428153 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
DDR1-235ENST00000428153 TPTE2Q6XPS3 522 aa23.07■■□□□ 1.28
DDR1-235ENST00000428153 CCDC24Q8N4L8 307 aa23.07■■□□□ 1.28
DDR1-235ENST00000428153 TAOK3Q9H2K8 898 aa23.07■■□□□ 1.28
DDR1-235ENST00000428153 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
DDR1-235ENST00000428153 PRPF40BQ6NWY9 871 aaKnown RBP23.06■■□□□ 1.28
DDR1-235ENST00000428153 KDM3BQ7LBC6 1761 aa23.06■■□□□ 1.28
DDR1-235ENST00000428153 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
DDR1-235ENST00000428153 ERFEQ4G0M1 354 aa23.05■■□□□ 1.28
DDR1-235ENST00000428153 NPR1P16066 1061 aa23.04■■□□□ 1.28
DDR1-235ENST00000428153 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
DDR1-235ENST00000428153 KLRG1Q96E93 195 aa23.04■■□□□ 1.28
DDR1-235ENST00000428153 NIP7Q9Y221 180 aaKnown RBP eCLIP23.04■■□□□ 1.28
DDR1-235ENST00000428153 PCNTO95613 3336 aa23.03■■□□□ 1.28
DDR1-235ENST00000428153 ERVV-1B6SEH8 477 aa23.03■■□□□ 1.28
DDR1-235ENST00000428153 C7orf43Q8WVR3 580 aa23.03■■□□□ 1.28
DDR1-235ENST00000428153 JMYQ8N9B5 988 aa23.02■■□□□ 1.28
DDR1-235ENST00000428153 POTECB2RU33 542 aa23.01■■□□□ 1.27
DDR1-235ENST00000428153 EIF4A1P60842 406 aaKnown RBP23.01■■□□□ 1.27
DDR1-235ENST00000428153 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
DDR1-235ENST00000428153 MIS18AQ9NYP9 233 aa23.01■■□□□ 1.27
DDR1-235ENST00000428153 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
DDR1-235ENST00000428153 ZNF219Q9P2Y4 722 aaPredicted RBP23■■□□□ 1.27
DDR1-235ENST00000428153 ERBB4Q15303 1308 aa23■■□□□ 1.27
DDR1-235ENST00000428153 CACNA1SQ13698 1873 aa23■■□□□ 1.27
DDR1-235ENST00000428153 ALDH1B1P30837 517 aa22.99■■□□□ 1.27
DDR1-235ENST00000428153 NYXQ9GZU5 481 aa22.99■■□□□ 1.27
DDR1-235ENST00000428153 RALBP1Q15311 655 aa22.98■■□□□ 1.27
DDR1-235ENST00000428153 HLFQ16534 295 aa22.98■■□□□ 1.27
DDR1-235ENST00000428153 MAP3K15Q6ZN16 1313 aa22.98■■□□□ 1.27
DDR1-235ENST00000428153 IBTKQ9P2D0 1353 aaPredicted RBP22.98■■□□□ 1.27
DDR1-235ENST00000428153 BABAM1Q9NWV8 329 aa22.97■■□□□ 1.27
DDR1-235ENST00000428153 RIC1Q4ADV7 1423 aa22.97■■□□□ 1.27
DDR1-235ENST00000428153 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
DDR1-235ENST00000428153 CRY2Q49AN0 593 aa22.96■■□□□ 1.27
DDR1-235ENST00000428153 RTKN2Q8IZC4 609 aa22.96■■□□□ 1.27
DDR1-235ENST00000428153 GTF2E1P29083 439 aaPredicted RBP22.95■■□□□ 1.26
DDR1-235ENST00000428153 NUP98P52948 1817 aa22.95■■□□□ 1.26
DDR1-235ENST00000428153 HTRA3P83110 453 aa22.95■■□□□ 1.26
DDR1-235ENST00000428153 KIF6Q6ZMV9 814 aa22.95■■□□□ 1.26
DDR1-235ENST00000428153 IQCA1LA6NCM1 817 aa22.94■■□□□ 1.26
DDR1-235ENST00000428153 L3MBTL3Q96JM7 780 aaPredicted RBP22.94■■□□□ 1.26
DDR1-235ENST00000428153 THUMPD2Q9BTF0 503 aaKnown RBP22.93■■□□□ 1.26
DDR1-235ENST00000428153 DDNO94850 711 aaPredicted RBP22.92■■□□□ 1.26
DDR1-235ENST00000428153 LMOD3Q0VAK6 560 aa22.92■■□□□ 1.26
DDR1-235ENST00000428153 CC2D2BQ6DHV5 1058 aa22.92■■□□□ 1.26
DDR1-235ENST00000428153 RRP7AQ9Y3A4 280 aaKnown RBP22.92■■□□□ 1.26
DDR1-235ENST00000428153 SCN4AP35499 1836 aa22.92■■□□□ 1.26
DDR1-235ENST00000428153 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
DDR1-235ENST00000428153 TTLL7Q6ZT98 887 aa22.91■■□□□ 1.26
DDR1-235ENST00000428153 FAM177BA6PVY3 158 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 HOXA10P31260 410 aaPredicted RBP22.9■■□□□ 1.26
DDR1-235ENST00000428153 CHADLQ6NUI6 762 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 GIGYF2Q6Y7W6 1299 aaKnown RBP22.9■■□□□ 1.26
DDR1-235ENST00000428153 NGEFQ8N5V2 710 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 PSMD1Q99460 953 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 TSPYL4Q9UJ04 414 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 SNED1Q8TER0 1413 aa22.9■■□□□ 1.26
DDR1-235ENST00000428153 ABCC12Q96J65 1359 aa22.89■■□□□ 1.26
DDR1-235ENST00000428153 MYL6BP14649 208 aa22.89■■□□□ 1.25
DDR1-235ENST00000428153 RIPK4P57078 832 aa22.89■■□□□ 1.25
DDR1-235ENST00000428153 ZNF34Q8IZ26 560 aa22.89■■□□□ 1.25
DDR1-235ENST00000428153 UBN2Q6ZU65 1347 aa22.88■■□□□ 1.25
DDR1-235ENST00000428153 PARP10Q53GL7 1025 aa22.88■■□□□ 1.25
DDR1-235ENST00000428153 LRP10Q7Z4F1 713 aa22.88■■□□□ 1.25
DDR1-235ENST00000428153 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
DDR1-235ENST00000428153 NUTM1Q86Y26 1132 aa22.87■■□□□ 1.25
DDR1-235ENST00000428153 ZNF277Q9NRM2 450 aaPredicted RBP22.87■■□□□ 1.25
DDR1-235ENST00000428153 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 FZD9O00144 591 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
DDR1-235ENST00000428153 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
DDR1-235ENST00000428153 LDHDQ86WU2 507 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 CRAMP1Q96RY5 1269 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 ZBTB3Q9H5J0 574 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 CREBZFQ9NS37 354 aa22.86■■□□□ 1.25
DDR1-235ENST00000428153 MYBBP1AQ9BQG0 1328 aaKnown RBP22.85■■□□□ 1.25
DDR1-235ENST00000428153 NTSR2O95665 410 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms