RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 HEG1Q9ULI3 1381 aa14.02□□□□□ -0.17
RDH11-202ENST00000428130 HSPA8P11142 646 aaKnown RBP14.02□□□□□ -0.17
RDH11-202ENST00000428130 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.17
RDH11-202ENST00000428130 FAM161AQ3B820 660 aa14.02□□□□□ -0.17
RDH11-202ENST00000428130 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
RDH11-202ENST00000428130 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
RDH11-202ENST00000428130 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
RDH11-202ENST00000428130 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
RDH11-202ENST00000428130 EAPPQ56P03 285 aaPredicted RBP14.01□□□□□ -0.17
RDH11-202ENST00000428130 C7orf43Q8WVR3 580 aa14.01□□□□□ -0.17
RDH11-202ENST00000428130 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
RDH11-202ENST00000428130 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
RDH11-202ENST00000428130 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
RDH11-202ENST00000428130 CAMTA2O94983 1202 aa14□□□□□ -0.17
RDH11-202ENST00000428130 ST5P78524 1137 aa14□□□□□ -0.17
RDH11-202ENST00000428130 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
RDH11-202ENST00000428130 SETDB2Q96T68 719 aa14□□□□□ -0.17
RDH11-202ENST00000428130 HACL1Q9UJ83 578 aa14□□□□□ -0.17
RDH11-202ENST00000428130 LTBP1Q14766 1721 aa14□□□□□ -0.17
RDH11-202ENST00000428130 NPHP1O15259 732 aa13.99□□□□□ -0.17
RDH11-202ENST00000428130 DEFB115Q30KQ5 88 aa13.99□□□□□ -0.17
RDH11-202ENST00000428130 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
RDH11-202ENST00000428130 ZNF790Q6PG37 636 aa13.99□□□□□ -0.17
RDH11-202ENST00000428130 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
RDH11-202ENST00000428130 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
RDH11-202ENST00000428130 WDR33Q9C0J8 1336 aaKnown RBP13.98□□□□□ -0.17
RDH11-202ENST00000428130 EPHX2P34913 555 aa13.98□□□□□ -0.17
RDH11-202ENST00000428130 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
RDH11-202ENST00000428130 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
RDH11-202ENST00000428130 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
RDH11-202ENST00000428130 A1BGP04217 495 aa13.97□□□□□ -0.17
RDH11-202ENST00000428130 MAP2K1Q02750 393 aaPredicted RBP13.97□□□□□ -0.17
RDH11-202ENST00000428130 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
RDH11-202ENST00000428130 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
RDH11-202ENST00000428130 CNTROBQ8N137 903 aa13.97□□□□□ -0.17
RDH11-202ENST00000428130 ZNF277Q9NRM2 450 aaPredicted RBP13.97□□□□□ -0.17
RDH11-202ENST00000428130 KNSTRNQ9Y448 316 aa13.97□□□□□ -0.17
RDH11-202ENST00000428130 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
RDH11-202ENST00000428130 NPR1P16066 1061 aa13.96□□□□□ -0.17
RDH11-202ENST00000428130 TEFQ10587 303 aa13.96□□□□□ -0.17
RDH11-202ENST00000428130 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
RDH11-202ENST00000428130 SNED1Q8TER0 1413 aa13.96□□□□□ -0.18
RDH11-202ENST00000428130 COL4A5P29400 1685 aa13.95□□□□□ -0.18
RDH11-202ENST00000428130 KLRG2A4D1S0 409 aaPredicted RBP13.95□□□□□ -0.18
RDH11-202ENST00000428130 FZD9O00144 591 aa13.95□□□□□ -0.18
RDH11-202ENST00000428130 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
RDH11-202ENST00000428130 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
RDH11-202ENST00000428130 OLFM4Q6UX06 510 aa13.95□□□□□ -0.18
RDH11-202ENST00000428130 NPM2Q86SE8 214 aaKnown RBP13.95□□□□□ -0.18
RDH11-202ENST00000428130 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
RDH11-202ENST00000428130 FMNL2Q96PY5 1086 aa13.95□□□□□ -0.18
RDH11-202ENST00000428130 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 RGS19P49795 217 aa13.94□□□□□ -0.18
RDH11-202ENST00000428130 MLLT1Q03111 559 aaPredicted RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 NBPF5PQ86XG9 351 aaPredicted RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 GPC2Q8N158 579 aa13.94□□□□□ -0.18
RDH11-202ENST00000428130 ABT1Q9ULW3 272 aaKnown RBP13.94□□□□□ -0.18
RDH11-202ENST00000428130 NUP98P52948 1817 aa13.94□□□□□ -0.18
RDH11-202ENST00000428130 CASP8AP2Q9UKL3 1982 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 RTKN2Q8IZC4 609 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
RDH11-202ENST00000428130 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
RDH11-202ENST00000428130 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
RDH11-202ENST00000428130 PIP4K2AP48426 406 aaPredicted RBP13.92□□□□□ -0.18
RDH11-202ENST00000428130 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
RDH11-202ENST00000428130 KCNQ3O43525 872 aa13.91□□□□□ -0.18
RDH11-202ENST00000428130 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
RDH11-202ENST00000428130 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
RDH11-202ENST00000428130 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
RDH11-202ENST00000428130 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
RDH11-202ENST00000428130 USP16Q9Y5T5 823 aa13.91□□□□□ -0.18
RDH11-202ENST00000428130 CYP4F22Q6NT55 531 aa13.9□□□□□ -0.18
RDH11-202ENST00000428130 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
RDH11-202ENST00000428130 PSMD1Q99460 953 aa13.9□□□□□ -0.18
RDH11-202ENST00000428130 ZNF652Q9Y2D9 606 aa13.9□□□□□ -0.18
RDH11-202ENST00000428130 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
RDH11-202ENST00000428130 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
RDH11-202ENST00000428130 ECE1P42892 770 aa13.89□□□□□ -0.19
RDH11-202ENST00000428130 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
RDH11-202ENST00000428130 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
RDH11-202ENST00000428130 BEGAINQ9BUH8 593 aa13.89□□□□□ -0.19
RDH11-202ENST00000428130 BTBD11A6QL63 1104 aa13.88□□□□□ -0.19
RDH11-202ENST00000428130 RGL2O15211 777 aa13.88□□□□□ -0.19
RDH11-202ENST00000428130 SCNN1DP51172 638 aa13.88□□□□□ -0.19
RDH11-202ENST00000428130 CST9Q5W186 159 aa13.88□□□□□ -0.19
RDH11-202ENST00000428130 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
RDH11-202ENST00000428130 NIP7Q9Y221 180 aaKnown RBP eCLIP13.88□□□□□ -0.19
RDH11-202ENST00000428130 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
RDH11-202ENST00000428130 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
RDH11-202ENST00000428130 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
RDH11-202ENST00000428130 EPS15P42566 896 aa13.87□□□□□ -0.19
RDH11-202ENST00000428130 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
RDH11-202ENST00000428130 GRM1Q13255 1194 aa13.87□□□□□ -0.19
RDH11-202ENST00000428130 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
RDH11-202ENST00000428130 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms