RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 SETDB2Q96T68 719 aa19.1■□□□□ 0.65
KDM5C-206ENST00000428012 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
KDM5C-206ENST00000428012 BCORQ6W2J9 1755 aa19.1■□□□□ 0.65
KDM5C-206ENST00000428012 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
KDM5C-206ENST00000428012 VEGFBP49765 207 aa19.09■□□□□ 0.65
KDM5C-206ENST00000428012 MASTLQ96GX5 879 aa19.09■□□□□ 0.65
KDM5C-206ENST00000428012 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
KDM5C-206ENST00000428012 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
KDM5C-206ENST00000428012 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.65
KDM5C-206ENST00000428012 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
KDM5C-206ENST00000428012 TEFQ10587 303 aa19.08■□□□□ 0.64
KDM5C-206ENST00000428012 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
KDM5C-206ENST00000428012 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
KDM5C-206ENST00000428012 SCN4AP35499 1836 aa19.08■□□□□ 0.64
KDM5C-206ENST00000428012 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
KDM5C-206ENST00000428012 GNAT3A8MTJ3 354 aa19.07■□□□□ 0.64
KDM5C-206ENST00000428012 CC2D1BQ5T0F9 858 aaKnown RBP19.07■□□□□ 0.64
KDM5C-206ENST00000428012 LDHDQ86WU2 507 aa19.07■□□□□ 0.64
KDM5C-206ENST00000428012 DZIP3Q86Y13 1208 aaKnown RBP19.07■□□□□ 0.64
KDM5C-206ENST00000428012 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
KDM5C-206ENST00000428012 ADAMTSL1Q8N6G6 1762 aa19.06■□□□□ 0.64
KDM5C-206ENST00000428012 FMNL2Q96PY5 1086 aa19.06■□□□□ 0.64
KDM5C-206ENST00000428012 PRDM10Q9NQV6 1147 aa19.06■□□□□ 0.64
KDM5C-206ENST00000428012 ZNF277Q9NRM2 450 aaPredicted RBP19.06■□□□□ 0.64
KDM5C-206ENST00000428012 ST5P78524 1137 aa19.05■□□□□ 0.64
KDM5C-206ENST00000428012 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
KDM5C-206ENST00000428012 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
KDM5C-206ENST00000428012 TMEM88BA6NKF7 163 aa19.04■□□□□ 0.64
KDM5C-206ENST00000428012 WBP1LQ9NX94 342 aa19.04■□□□□ 0.64
KDM5C-206ENST00000428012 KLRG2A4D1S0 409 aaPredicted RBP19.03■□□□□ 0.64
KDM5C-206ENST00000428012 U2SURPO15042 1029 aaKnown RBP19.03■□□□□ 0.64
KDM5C-206ENST00000428012 NPHP1O15259 732 aa19.03■□□□□ 0.64
KDM5C-206ENST00000428012 EAPPQ56P03 285 aaPredicted RBP19.03■□□□□ 0.64
KDM5C-206ENST00000428012 SOGA3Q5TF21 947 aa19.03■□□□□ 0.64
KDM5C-206ENST00000428012 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
KDM5C-206ENST00000428012 CTCFP49711 727 aaPredicted RBP19.02■□□□□ 0.64
KDM5C-206ENST00000428012 LBX1P52954 281 aa19.02■□□□□ 0.64
KDM5C-206ENST00000428012 FKBP4Q02790 459 aaKnown RBP eCLIP19.02■□□□□ 0.64
KDM5C-206ENST00000428012 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
KDM5C-206ENST00000428012 NBPF5PQ86XG9 351 aaPredicted RBP19.02■□□□□ 0.64
KDM5C-206ENST00000428012 BTBD11A6QL63 1104 aa19.01■□□□□ 0.63
KDM5C-206ENST00000428012 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
KDM5C-206ENST00000428012 NPR1P16066 1061 aa19.01■□□□□ 0.63
KDM5C-206ENST00000428012 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
KDM5C-206ENST00000428012 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
KDM5C-206ENST00000428012 EPHX2P34913 555 aa19■□□□□ 0.63
KDM5C-206ENST00000428012 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
KDM5C-206ENST00000428012 MAP1SQ66K74 1059 aaPredicted RBP19■□□□□ 0.63
KDM5C-206ENST00000428012 CLEC4GQ6UXB4 293 aa19■□□□□ 0.63
KDM5C-206ENST00000428012 HACL1Q9UJ83 578 aa19■□□□□ 0.63
KDM5C-206ENST00000428012 SNED1Q8TER0 1413 aa19■□□□□ 0.63
KDM5C-206ENST00000428012 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
KDM5C-206ENST00000428012 COL4A5P29400 1685 aa18.99■□□□□ 0.63
KDM5C-206ENST00000428012 FZD9O00144 591 aa18.99■□□□□ 0.63
KDM5C-206ENST00000428012 SLC51AQ86UW1 340 aa18.99■□□□□ 0.63
KDM5C-206ENST00000428012 CLEC11AQ9Y240 323 aa18.99■□□□□ 0.63
KDM5C-206ENST00000428012 RASSF10A6NK89 507 aa18.98■□□□□ 0.63
KDM5C-206ENST00000428012 FAM177BA6PVY3 158 aa18.98■□□□□ 0.63
KDM5C-206ENST00000428012 HSPA8P11142 646 aaKnown RBP18.98■□□□□ 0.63
KDM5C-206ENST00000428012 FMR1Q06787 632 aaKnown RBP eCLIP18.98■□□□□ 0.633e-6■■■■□ 20.8
KDM5C-206ENST00000428012 CNTROBQ8N137 903 aa18.98■□□□□ 0.63
KDM5C-206ENST00000428012 AIDAQ96BJ3 306 aa18.98■□□□□ 0.63
KDM5C-206ENST00000428012 LTBP1Q14766 1721 aa18.97■□□□□ 0.63
KDM5C-206ENST00000428012 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
KDM5C-206ENST00000428012 HLFQ16534 295 aa18.97■□□□□ 0.63
KDM5C-206ENST00000428012 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
KDM5C-206ENST00000428012 SYNE4Q8N205 404 aa18.97■□□□□ 0.63
KDM5C-206ENST00000428012 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
KDM5C-206ENST00000428012 NIP7Q9Y221 180 aaKnown RBP eCLIP18.97■□□□□ 0.63
KDM5C-206ENST00000428012 IARSP41252 1262 aaKnown RBP18.96■□□□□ 0.63
KDM5C-206ENST00000428012 DEFB115Q30KQ5 88 aa18.96■□□□□ 0.63
KDM5C-206ENST00000428012 TPTE2Q6XPS3 522 aa18.95■□□□□ 0.62
KDM5C-206ENST00000428012 MCM10Q7L590 875 aa18.95■□□□□ 0.62
KDM5C-206ENST00000428012 RTKN2Q8IZC4 609 aa18.95■□□□□ 0.62
KDM5C-206ENST00000428012 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
KDM5C-206ENST00000428012 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
KDM5C-206ENST00000428012 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
KDM5C-206ENST00000428012 ABHD8Q96I13 439 aa18.94■□□□□ 0.62
KDM5C-206ENST00000428012 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
KDM5C-206ENST00000428012 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
KDM5C-206ENST00000428012 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
KDM5C-206ENST00000428012 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
KDM5C-206ENST00000428012 GPC2Q8N158 579 aa18.92■□□□□ 0.62
KDM5C-206ENST00000428012 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
KDM5C-206ENST00000428012 EPS15P42566 896 aa18.91■□□□□ 0.62
KDM5C-206ENST00000428012 CRY2Q49AN0 593 aa18.91■□□□□ 0.62
KDM5C-206ENST00000428012 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
KDM5C-206ENST00000428012 PSMD1Q99460 953 aa18.91■□□□□ 0.62
KDM5C-206ENST00000428012 ALDH1B1P30837 517 aa18.9■□□□□ 0.62
KDM5C-206ENST00000428012 FAM161AQ3B820 660 aa18.9■□□□□ 0.62
KDM5C-206ENST00000428012 ABT1Q9ULW3 272 aaKnown RBP18.9■□□□□ 0.62
KDM5C-206ENST00000428012 RGL2O15211 777 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 SLC34A2O95436 690 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 SCNN1DP51172 638 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 CST9Q5W186 159 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 MIS18AQ9NYP9 233 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 GJA3Q9Y6H8 435 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.61
KDM5C-206ENST00000428012 NUP98P52948 1817 aa18.88■□□□□ 0.61
KDM5C-206ENST00000428012 TRAF5O00463 557 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms