RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
XPC-202ENST00000427795 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
XPC-202ENST00000427795 PDE4DIPQ5VU43 2346 aa16.71■□□□□ 0.27
XPC-202ENST00000427795 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
XPC-202ENST00000427795 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
XPC-202ENST00000427795 OLFM4Q6UX06 510 aa16.7■□□□□ 0.26
XPC-202ENST00000427795 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
XPC-202ENST00000427795 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
XPC-202ENST00000427795 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
XPC-202ENST00000427795 SETDB2Q96T68 719 aa16.69■□□□□ 0.26
XPC-202ENST00000427795 ZNF277Q9NRM2 450 aaPredicted RBP16.69■□□□□ 0.26
XPC-202ENST00000427795 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
XPC-202ENST00000427795 A1BGP04217 495 aa16.68■□□□□ 0.26
XPC-202ENST00000427795 EPHX2P34913 555 aa16.68■□□□□ 0.26
XPC-202ENST00000427795 IL6STP40189 918 aaPredicted RBP16.68■□□□□ 0.26
XPC-202ENST00000427795 MAP1SQ66K74 1059 aaPredicted RBP16.68■□□□□ 0.26
XPC-202ENST00000427795 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
XPC-202ENST00000427795 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
XPC-202ENST00000427795 ST5P78524 1137 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
XPC-202ENST00000427795 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
XPC-202ENST00000427795 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
XPC-202ENST00000427795 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
XPC-202ENST00000427795 NPHP1O15259 732 aa16.65■□□□□ 0.26
XPC-202ENST00000427795 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
XPC-202ENST00000427795 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
XPC-202ENST00000427795 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
XPC-202ENST00000427795 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
XPC-202ENST00000427795 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.251e-8■■■□□ 17
XPC-202ENST00000427795 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
XPC-202ENST00000427795 COL4A5P29400 1685 aa16.63■□□□□ 0.25
XPC-202ENST00000427795 FZD9O00144 591 aa16.63■□□□□ 0.25
XPC-202ENST00000427795 NPR1P16066 1061 aa16.63■□□□□ 0.25
XPC-202ENST00000427795 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
XPC-202ENST00000427795 RGS19P49795 217 aa16.63■□□□□ 0.25
XPC-202ENST00000427795 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
XPC-202ENST00000427795 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
XPC-202ENST00000427795 ABT1Q9ULW3 272 aaKnown RBP16.63■□□□□ 0.25
XPC-202ENST00000427795 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
XPC-202ENST00000427795 CCDC85CA6NKD9 419 aa16.62■□□□□ 0.25
XPC-202ENST00000427795 KCNQ3O43525 872 aa16.62■□□□□ 0.25
XPC-202ENST00000427795 MLLT1Q03111 559 aaPredicted RBP16.62■□□□□ 0.25
XPC-202ENST00000427795 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
XPC-202ENST00000427795 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
XPC-202ENST00000427795 DDX21Q9NR30 783 aaKnown RBP eCLIP16.62■□□□□ 0.25
XPC-202ENST00000427795 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
XPC-202ENST00000427795 TEFQ10587 303 aa16.61■□□□□ 0.25
XPC-202ENST00000427795 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
XPC-202ENST00000427795 TRPM7Q96QT4 1865 aa16.61■□□□□ 0.25
XPC-202ENST00000427795 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
XPC-202ENST00000427795 GPC2Q8N158 579 aa16.6■□□□□ 0.25
XPC-202ENST00000427795 CAPNS2Q96L46 248 aa16.6■□□□□ 0.25
XPC-202ENST00000427795 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
XPC-202ENST00000427795 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
XPC-202ENST00000427795 RTKN2Q8IZC4 609 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 TIMELESSQ9UNS1 1208 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
XPC-202ENST00000427795 COL3A1P02461 1466 aaPredicted RBP16.59■□□□□ 0.25
XPC-202ENST00000427795 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.25
XPC-202ENST00000427795 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
XPC-202ENST00000427795 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
XPC-202ENST00000427795 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
XPC-202ENST00000427795 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
XPC-202ENST00000427795 TRAF5O00463 557 aa16.57■□□□□ 0.24
XPC-202ENST00000427795 GRM1Q13255 1194 aa16.57■□□□□ 0.24
XPC-202ENST00000427795 CST9Q5W186 159 aa16.57■□□□□ 0.24
XPC-202ENST00000427795 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
XPC-202ENST00000427795 SLC51AQ86UW1 340 aa16.57■□□□□ 0.24
XPC-202ENST00000427795 GPR101Q96P66 508 aaPredicted RBP16.57■□□□□ 0.24
XPC-202ENST00000427795 SCNN1DP51172 638 aa16.56■□□□□ 0.24
XPC-202ENST00000427795 PAXIP1Q6ZW49 1069 aaPredicted RBP16.56■□□□□ 0.24
XPC-202ENST00000427795 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
XPC-202ENST00000427795 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
XPC-202ENST00000427795 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
XPC-202ENST00000427795 AOC2O75106 756 aa16.55■□□□□ 0.24
XPC-202ENST00000427795 EPS15P42566 896 aa16.55■□□□□ 0.24
XPC-202ENST00000427795 PSMD1Q99460 953 aa16.55■□□□□ 0.24
XPC-202ENST00000427795 NIP7Q9Y221 180 aaKnown RBP eCLIP16.55■□□□□ 0.24
XPC-202ENST00000427795 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
XPC-202ENST00000427795 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
XPC-202ENST00000427795 ABCC12Q96J65 1359 aa16.53■□□□□ 0.24
XPC-202ENST00000427795 ECE1P42892 770 aa16.53■□□□□ 0.24
XPC-202ENST00000427795 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
XPC-202ENST00000427795 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
XPC-202ENST00000427795 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
XPC-202ENST00000427795 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms