RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CALML4Q96GE6 196 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 CENPHQ9H3R5 247 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 LMTK3Q96Q04 1460 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 RPGRIP1LQ68CZ1 1315 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 ARL1P40616 181 aaPredicted RBP6.62□□□□□ -1.35
HERC4-206ENST00000427635 CCDC152Q4G0S7 254 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 PICK1Q9NRD5 415 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 GRIN2BQ13224 1484 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 ERLIN1O75477 346 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
HERC4-206ENST00000427635 CCDC175P0C221 793 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 KAT14Q9H8E8 782 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 CABP1Q9NZU7 370 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 MRC2Q9UBG0 1479 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 PHACTR2O75167 634 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 RRP1P56182 461 aaKnown RBP6.62□□□□□ -1.35
HERC4-206ENST00000427635 IGBP1P78318 339 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
HERC4-206ENST00000427635 CACNA2D4Q7Z3S7 1137 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 NAP1L4Q99733 375 aaKnown RBP6.62□□□□□ -1.35
HERC4-206ENST00000427635 LRRC27Q9C0I9 530 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 PRKAG2Q9UGJ0 569 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 SPA17Q15506 151 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 ALS2CR12Q96Q35 445 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 GSTTP1A0A1W2PQM5 241 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 STX6O43752 255 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 AMPD3Q01432 767 aa6.62□□□□□ -1.35
HERC4-206ENST00000427635 KIAA0754O94854 1291 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 ZWINTO95229 277 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 ACTN2P35609 894 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SPOCK3Q9BQ16 436 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 CCDC194A0A1B0GVG4 234 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SSFA2P28290 1259 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 ATP6V1AP38606 617 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SSRP1Q08945 709 aaKnown RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 RBM17Q96I25 401 aaKnown RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 CRNKL1Q9BZJ0 848 aaKnown RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 U3KPZ7 1027 aaPredicted RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 BAG6P46379 1132 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 ERMNQ8TAM6 284 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SUDS3Q9H7L9 328 aaPredicted RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 IVNS1ABPQ9Y6Y0 642 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SMTNL1A8MU46 457 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 GCOM1H8Y6P7 765 aaPredicted RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 RIOK3O14730 519 aaKnown RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 MYZAPP0CAP1 466 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 BLOC1S2Q6QNY1 142 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 CCDC148Q8NFR7 591 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 CPLX3Q8WVH0 158 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 TNPO1Q92973 898 aaKnown RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 TTC12Q9H892 705 aaPredicted RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 AKNAQ7Z591 1439 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 NDC80O14777 642 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 SNX16P57768 344 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 EAPPQ56P03 285 aaPredicted RBP6.61□□□□□ -1.35
HERC4-206ENST00000427635 KRBA2Q6ZNG9 492 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 ATAD2Q6PL18 1390 aa6.61□□□□□ -1.35
HERC4-206ENST00000427635 M0QZ92 97 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 KCNA1Q09470 495 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 TRMT1LQ7Z2T5 733 aaKnown RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 AFAP1Q8N556 730 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 PHF8Q9UPP1 1060 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 SLC12A7Q9Y666 1083 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 MAP2K1Q02750 393 aaPredicted RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 FOXD4Q12950 439 aaPredicted RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 LEKR1Q6ZMV7 388 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 DYDC1Q8WWB3 177 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 CFAP45Q9UL16 551 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 ODF2LQ9ULJ1 636 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 RAD54L2Q9Y4B4 1467 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 MACROD2A1Z1Q3 448 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 TBCAO75347 108 aaKnown RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 CXorf38Q8TB03 319 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 PDRG1Q9NUG6 133 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 SLC5A4Q9NY91 659 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 NBPF11Q86T75 865 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 VAT1LQ9HCJ6 419 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 GAS8O95995 478 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 ZSCAN31Q96LW9 406 aaPredicted RBP6.6□□□□□ -1.35
HERC4-206ENST00000427635 TNMDQ9H2S6 317 aa6.6□□□□□ -1.35
HERC4-206ENST00000427635 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.35
HERC4-206ENST00000427635 ERBINQ96RT1 1412 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 TSPY2A6NKD2 308 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
HERC4-206ENST00000427635 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.35
HERC4-206ENST00000427635 IMPG2Q9BZV3 1241 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 TSPY26PQ9H489 355 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 IFT140Q96RY7 1462 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 GPTP24298 496 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 USP8P40818 1118 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 DDX12PQ92771 950 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 C22orf23Q9BZE7 217 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 GOPCQ9HD26 462 aa6.59□□□□□ -1.35
HERC4-206ENST00000427635 ERICH4A6NGS2 130 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms