RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 IL13P35225 146 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 RHPN1Q8TCX5 695 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 BAG3O95817 575 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
RPL28-202ENST00000426763 A0A0U1RQG5 324 aaPredicted RBP16.33■□□□□ 0.2
RPL28-202ENST00000426763 TRAK2O60296 914 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 CAVIN1Q6NZI2 390 aaKnown RBP16.33■□□□□ 0.2
RPL28-202ENST00000426763 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
RPL28-202ENST00000426763 LMBR1LQ6UX01 489 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 TFCP2L1Q9NZI6 479 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.2
RPL28-202ENST00000426763 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
RPL28-202ENST00000426763 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
RPL28-202ENST00000426763 VAMP4O75379 141 aa16.32■□□□□ 0.2
RPL28-202ENST00000426763 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
RPL28-202ENST00000426763 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
RPL28-202ENST00000426763 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
RPL28-202ENST00000426763 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
RPL28-202ENST00000426763 ZNF76P36508 570 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 NBPF14Q5TI25 921 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 PIBF1Q8WXW3 757 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
RPL28-202ENST00000426763 GSTO1P78417 241 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 ANKRD44Q8N8A2 993 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
RPL28-202ENST00000426763 PTPRTO14522 1441 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 BMP2KLQ5H9B9 411 aa16.31■□□□□ 0.2
RPL28-202ENST00000426763 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
RPL28-202ENST00000426763 OFD1O75665 1012 aa16.3■□□□□ 0.2
RPL28-202ENST00000426763 UPF3BQ9BZI7 483 aaKnown RBP16.3■□□□□ 0.2
RPL28-202ENST00000426763 HOMER1Q86YM7 354 aa16.3■□□□□ 0.2
RPL28-202ENST00000426763 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
RPL28-202ENST00000426763 FILIP1LQ4L180 1135 aa16.3■□□□□ 0.2
RPL28-202ENST00000426763 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
RPL28-202ENST00000426763 DDX11Q96FC9 970 aa16.3■□□□□ 0.2
RPL28-202ENST00000426763 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
RPL28-202ENST00000426763 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 TTC22Q5TAA0 569 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPL28-202ENST00000426763 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
RPL28-202ENST00000426763 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
RPL28-202ENST00000426763 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 TSPY26PQ9H489 355 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 PRM3Q9NNZ6 103 aa16.29■□□□□ 0.2
RPL28-202ENST00000426763 STIM1Q13586 685 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 DACH1Q9UI36 760 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
RPL28-202ENST00000426763 IFIT3O14879 490 aaKnown RBP16.28■□□□□ 0.2
RPL28-202ENST00000426763 HLA-DOAP06340 250 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 ZFYP08048 801 aaPredicted RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 CCDC96Q2M329 555 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 RNF214Q8ND24 703 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 BMP2KQ9NSY1 1161 aaPredicted RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 POLD1P28340 1107 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 PDE4BQ07343 736 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 NUCB1Q02818 461 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 PDILTQ8N807 584 aa16.27■□□□□ 0.2
RPL28-202ENST00000426763 CRNKL1Q9BZJ0 848 aaKnown RBP16.27■□□□□ 0.2
RPL28-202ENST00000426763 GNPATO15228 680 aa16.27■□□□□ 0.19
RPL28-202ENST00000426763 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.19
RPL28-202ENST00000426763 TNMDQ9H2S6 317 aa16.27■□□□□ 0.19
RPL28-202ENST00000426763 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.19
RPL28-202ENST00000426763 IGHDP01880 384 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 HOXB7P09629 217 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 MRE11P49959 708 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
RPL28-202ENST00000426763 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 MYO1BO43795 1136 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 NAP1L1P55209 391 aaKnown RBP16.26■□□□□ 0.19
RPL28-202ENST00000426763 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
RPL28-202ENST00000426763 CATIPQ7Z7H3 387 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 USP21Q9UK80 565 aa16.26■□□□□ 0.19
RPL28-202ENST00000426763 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
RPL28-202ENST00000426763 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 CWF19L2Q2TBE0 894 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms