RNA–Protein interactions for RNA: ENST00000426297.1

CAPN10-210, Transcript of calpain 10, humanhuman

TSL 3

Gene CAPN10, Length 706 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-210ENST00000426297 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
CAPN10-210ENST00000426297 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
CAPN10-210ENST00000426297 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
CAPN10-210ENST00000426297 XAGE3Q8WTP9 111 aa13.31□□□□□ -0.28
CAPN10-210ENST00000426297 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
CAPN10-210ENST00000426297 MMP10P09238 476 aa13.3□□□□□ -0.28
CAPN10-210ENST00000426297 DDR1Q08345 913 aa13.3□□□□□ -0.28
CAPN10-210ENST00000426297 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
CAPN10-210ENST00000426297 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
CAPN10-210ENST00000426297 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
CAPN10-210ENST00000426297 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
CAPN10-210ENST00000426297 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
CAPN10-210ENST00000426297 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 HLFQ16534 295 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 MAP3K15Q6ZN16 1313 aa13.29□□□□□ -0.28
CAPN10-210ENST00000426297 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
CAPN10-210ENST00000426297 LAMB2P55268 1798 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 BRCA1P38398 1863 aaKnown RBP13.28□□□□□ -0.28
CAPN10-210ENST00000426297 POLD1P28340 1107 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 NFIXQ14938 502 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 TBC1D9BQ66K14 1250 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 G2E3Q7L622 706 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 HYPKQ9NX55 129 aa13.28□□□□□ -0.28
CAPN10-210ENST00000426297 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
CAPN10-210ENST00000426297 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.28
CAPN10-210ENST00000426297 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
CAPN10-210ENST00000426297 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
CAPN10-210ENST00000426297 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
CAPN10-210ENST00000426297 TM4SF1P30408 202 aa13.26□□□□□ -0.29
CAPN10-210ENST00000426297 DDX60Q8IY21 1712 aaKnown RBP13.26□□□□□ -0.29
CAPN10-210ENST00000426297 ATP10DQ9P241 1426 aa13.26□□□□□ -0.29
CAPN10-210ENST00000426297 PPP1R1BQ9UD71 204 aaPredicted RBP13.26□□□□□ -0.29
CAPN10-210ENST00000426297 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 ERVV-1B6SEH8 477 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 MYH3P11055 1940 aa13.25□□□□□ -0.29
CAPN10-210ENST00000426297 ADCY9O60503 1353 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 UBN2Q6ZU65 1347 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 GPTP24298 496 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 FLIIQ13045 1269 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
CAPN10-210ENST00000426297 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN10-210ENST00000426297 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
CAPN10-210ENST00000426297 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
CAPN10-210ENST00000426297 SERPINB2P05120 415 aa13.23□□□□□ -0.29
CAPN10-210ENST00000426297 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
CAPN10-210ENST00000426297 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
CAPN10-210ENST00000426297 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
CAPN10-210ENST00000426297 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
CAPN10-210ENST00000426297 RGL2O15211 777 aa13.22□□□□□ -0.29
CAPN10-210ENST00000426297 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
CAPN10-210ENST00000426297 CCDC24Q8N4L8 307 aa13.22□□□□□ -0.29
CAPN10-210ENST00000426297 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
CAPN10-210ENST00000426297 TAF1P21675 1872 aa13.22□□□□□ -0.29
CAPN10-210ENST00000426297 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.29
CAPN10-210ENST00000426297 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
CAPN10-210ENST00000426297 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
CAPN10-210ENST00000426297 RIC3Q7Z5B4 369 aa13.21□□□□□ -0.29
CAPN10-210ENST00000426297 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
CAPN10-210ENST00000426297 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
CAPN10-210ENST00000426297 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
CAPN10-210ENST00000426297 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 DDX58O95786 925 aaKnown RBP13.2□□□□□ -0.3
CAPN10-210ENST00000426297 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
CAPN10-210ENST00000426297 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 NBPF5PQ86XG9 351 aaPredicted RBP13.2□□□□□ -0.3
CAPN10-210ENST00000426297 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 MYD88Q99836 296 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 PXDNLA1KZ92 1463 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
CAPN10-210ENST00000426297 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 F6X3S4 739 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 NTSR2O95665 410 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 NLRP10Q86W26 655 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
CAPN10-210ENST00000426297 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
CAPN10-210ENST00000426297 IBTKQ9P2D0 1353 aaPredicted RBP13.19□□□□□ -0.3
CAPN10-210ENST00000426297 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
CAPN10-210ENST00000426297 NPHP1O15259 732 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms