RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
HDAC6-206ENST00000426196 PANK3Q9H999 370 aa19.32■□□□□ 0.68
HDAC6-206ENST00000426196 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
HDAC6-206ENST00000426196 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
HDAC6-206ENST00000426196 SRGNP10124 158 aa19.31■□□□□ 0.68
HDAC6-206ENST00000426196 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
HDAC6-206ENST00000426196 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
HDAC6-206ENST00000426196 MLLT1Q03111 559 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-206ENST00000426196 PCDH10Q9P2E7 1040 aa19.3■□□□□ 0.68
HDAC6-206ENST00000426196 WDR33Q9C0J8 1336 aaKnown RBP19.29■□□□□ 0.68
HDAC6-206ENST00000426196 EPHX2P34913 555 aa19.29■□□□□ 0.68
HDAC6-206ENST00000426196 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-206ENST00000426196 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-206ENST00000426196 ABT1Q9ULW3 272 aaKnown RBP19.29■□□□□ 0.68
HDAC6-206ENST00000426196 BCORQ6W2J9 1755 aa19.29■□□□□ 0.68
HDAC6-206ENST00000426196 ZNF541Q9H0D2 1346 aa19.28■□□□□ 0.68
HDAC6-206ENST00000426196 IL6STP40189 918 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-206ENST00000426196 CNTROBQ8N137 903 aa19.28■□□□□ 0.68
HDAC6-206ENST00000426196 CCDC85CA6NKD9 419 aa19.27■□□□□ 0.68
HDAC6-206ENST00000426196 HMOX1P09601 288 aa19.27■□□□□ 0.68
HDAC6-206ENST00000426196 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.68
HDAC6-206ENST00000426196 MTHFSDQ2M296 383 aaKnown RBP19.27■□□□□ 0.68
HDAC6-206ENST00000426196 BEGAINQ9BUH8 593 aa19.27■□□□□ 0.68
HDAC6-206ENST00000426196 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.68
HDAC6-206ENST00000426196 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-206ENST00000426196 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-206ENST00000426196 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
HDAC6-206ENST00000426196 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
HDAC6-206ENST00000426196 CAMTA2O94983 1202 aa19.25■□□□□ 0.67
HDAC6-206ENST00000426196 C7orf43Q8WVR3 580 aa19.25■□□□□ 0.67
HDAC6-206ENST00000426196 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-206ENST00000426196 PDE4DIPQ5VU43 2346 aa19.25■□□□□ 0.67
HDAC6-206ENST00000426196 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
HDAC6-206ENST00000426196 NPR1P16066 1061 aa19.24■□□□□ 0.67
HDAC6-206ENST00000426196 TEFQ10587 303 aa19.24■□□□□ 0.67
HDAC6-206ENST00000426196 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
HDAC6-206ENST00000426196 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-206ENST00000426196 ECE1P42892 770 aa19.23■□□□□ 0.67
HDAC6-206ENST00000426196 RGS19P49795 217 aa19.23■□□□□ 0.67
HDAC6-206ENST00000426196 PAXIP1Q6ZW49 1069 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-206ENST00000426196 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-206ENST00000426196 RTKN2Q8IZC4 609 aa19.23■□□□□ 0.67
HDAC6-206ENST00000426196 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
HDAC6-206ENST00000426196 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
HDAC6-206ENST00000426196 A1BGP04217 495 aa19.21■□□□□ 0.67
HDAC6-206ENST00000426196 GPC2Q8N158 579 aa19.21■□□□□ 0.67
HDAC6-206ENST00000426196 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
HDAC6-206ENST00000426196 FMNL2Q96PY5 1086 aa19.21■□□□□ 0.67
HDAC6-206ENST00000426196 DDX21Q9NR30 783 aaKnown RBP eCLIP19.21■□□□□ 0.67
HDAC6-206ENST00000426196 FZD9O00144 591 aa19.2■□□□□ 0.66
HDAC6-206ENST00000426196 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
HDAC6-206ENST00000426196 ZNF652Q9Y2D9 606 aa19.2■□□□□ 0.66
HDAC6-206ENST00000426196 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-206ENST00000426196 GRM1Q13255 1194 aa19.19■□□□□ 0.66
HDAC6-206ENST00000426196 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
HDAC6-206ENST00000426196 GPR101Q96P66 508 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-206ENST00000426196 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
HDAC6-206ENST00000426196 OLFM4Q6UX06 510 aa19.18■□□□□ 0.66
HDAC6-206ENST00000426196 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
HDAC6-206ENST00000426196 TNRC18O15417 2968 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-206ENST00000426196 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
HDAC6-206ENST00000426196 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-206ENST00000426196 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
HDAC6-206ENST00000426196 DIAPH1O60610 1272 aaKnown RBP19.17■□□□□ 0.66
HDAC6-206ENST00000426196 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
HDAC6-206ENST00000426196 SYNE4Q8N205 404 aa19.17■□□□□ 0.66
HDAC6-206ENST00000426196 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
HDAC6-206ENST00000426196 ALDH1B1P30837 517 aa19.16■□□□□ 0.66
HDAC6-206ENST00000426196 EIF6P56537 245 aaKnown RBP19.16■□□□□ 0.66
HDAC6-206ENST00000426196 CYP4F22Q6NT55 531 aa19.16■□□□□ 0.66
HDAC6-206ENST00000426196 TPTE2Q6XPS3 522 aa19.16■□□□□ 0.66
HDAC6-206ENST00000426196 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
HDAC6-206ENST00000426196 GJA3Q9Y6H8 435 aa19.16■□□□□ 0.66
HDAC6-206ENST00000426196 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
HDAC6-206ENST00000426196 LTBP1Q14766 1721 aa19.14■□□□□ 0.66
HDAC6-206ENST00000426196 PSMD1Q99460 953 aa19.14■□□□□ 0.65
HDAC6-206ENST00000426196 CA12O43570 354 aa19.13■□□□□ 0.65
HDAC6-206ENST00000426196 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
HDAC6-206ENST00000426196 MAP2K2P36507 400 aa19.13■□□□□ 0.65
HDAC6-206ENST00000426196 TSKSQ9UJT2 592 aa19.13■□□□□ 0.65
HDAC6-206ENST00000426196 NIP7Q9Y221 180 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC6-206ENST00000426196 PIP4K2AP48426 406 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-206ENST00000426196 FMR1Q06787 632 aaKnown RBP eCLIP19.12■□□□□ 0.65
HDAC6-206ENST00000426196 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-206ENST00000426196 TLL2Q9Y6L7 1015 aa19.12■□□□□ 0.65
HDAC6-206ENST00000426196 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
HDAC6-206ENST00000426196 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
HDAC6-206ENST00000426196 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-206ENST00000426196 CC2D2BQ6DHV5 1058 aa19.11■□□□□ 0.65
HDAC6-206ENST00000426196 USP50Q70EL3 339 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-206ENST00000426196 MCOLN1Q9GZU1 580 aa19.11■□□□□ 0.65
HDAC6-206ENST00000426196 RGL2O15211 777 aa19.1■□□□□ 0.65
HDAC6-206ENST00000426196 EPS15P42566 896 aa19.1■□□□□ 0.65
HDAC6-206ENST00000426196 SCNN1DP51172 638 aa19.1■□□□□ 0.65
HDAC6-206ENST00000426196 CST9Q5W186 159 aa19.1■□□□□ 0.65
HDAC6-206ENST00000426196 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
HDAC6-206ENST00000426196 SNED1Q8TER0 1413 aa19.09■□□□□ 0.65
HDAC6-206ENST00000426196 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
HDAC6-206ENST00000426196 COL4A5P29400 1685 aa19.09■□□□□ 0.65
HDAC6-206ENST00000426196 TRAF5O00463 557 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms