RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 SIK1P57059 783 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 RIPK4P57078 832 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 CCDC146Q8IYE0 955 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 TMC2Q8TDI7 906 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
TPM3P4-201ENST00000425942 ZNF790Q6PG37 636 aa11.73□□□□□ -0.53
TPM3P4-201ENST00000425942 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
TPM3P4-201ENST00000425942 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
TPM3P4-201ENST00000425942 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
TPM3P4-201ENST00000425942 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 BTBD11A6QL63 1104 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 MCM10Q7L590 875 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 ZSWIM6Q9HCJ5 1215 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 STK32BQ9NY57 414 aa11.72□□□□□ -0.53
TPM3P4-201ENST00000425942 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.53
TPM3P4-201ENST00000425942 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
TPM3P4-201ENST00000425942 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
TPM3P4-201ENST00000425942 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.53
TPM3P4-201ENST00000425942 IL16Q14005 1332 aa11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 APAF1O14727 1248 aa11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 GTPBP6O43824 516 aaPredicted RBP11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 SLC15A2Q16348 729 aa11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 FLAD1Q8NFF5 587 aa11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
TPM3P4-201ENST00000425942 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 SSFA2P28290 1259 aa11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 FAM9BQ8IZU0 186 aa11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 AK7Q96M32 723 aa11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 IFT57Q9NWB7 429 aa11.69□□□□□ -0.54
TPM3P4-201ENST00000425942 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
TPM3P4-201ENST00000425942 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 STARD3NLO95772 234 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 HOXB7P09629 217 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 GNAI1P63096 354 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
TPM3P4-201ENST00000425942 KIF13BQ9NQT8 1826 aa11.66□□□□□ -0.54
TPM3P4-201ENST00000425942 ITPK1Q13572 414 aa11.66□□□□□ -0.54
TPM3P4-201ENST00000425942 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
TPM3P4-201ENST00000425942 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
TPM3P4-201ENST00000425942 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
TPM3P4-201ENST00000425942 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 CHL1O00533 1208 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 SNRPA1P09661 255 aaKnown RBP11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 WDR63Q8IWG1 891 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 THUMPD2Q9BTF0 503 aaKnown RBP11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
TPM3P4-201ENST00000425942 COL15A1P39059 1388 aa11.65□□□□□ -0.55
TPM3P4-201ENST00000425942 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 GNPATO15228 680 aa11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 CYP19A1P11511 503 aaPredicted RBP11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 CRKLP46109 303 aaKnown RBP11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 NUP98P52948 1817 aa11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
TPM3P4-201ENST00000425942 ZNF521Q96K83 1311 aa11.63□□□□□ -0.55
TPM3P4-201ENST00000425942 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
TPM3P4-201ENST00000425942 N4BP2Q86UW6 1770 aaPredicted RBP11.63□□□□□ -0.55
TPM3P4-201ENST00000425942 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 SLC34A2O95436 690 aa11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 FOXK1P85037 733 aa11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
TPM3P4-201ENST00000425942 A0A087WZG4 1122 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 GIGYF1O75420 1035 aaPredicted RBP11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 IL6STP40189 918 aaPredicted RBP11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 KCNQ4P56696 695 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 DSG2Q14126 1118 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms