RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 HSP90AB3PQ58FF7 597 aa30.75■■■□□ 2.51
APOE-202ENST00000425718 PLBD2Q8NHP8 589 aa30.75■■■□□ 2.51
APOE-202ENST00000425718 TBC1D2BQ9UPU7 963 aa30.75■■■□□ 2.51
APOE-202ENST00000425718 PTPRCP08575 1304 aa30.74■■■□□ 2.51
APOE-202ENST00000425718 ANKRD13DQ6ZTN6 518 aa30.74■■■□□ 2.51
APOE-202ENST00000425718 NLGN1Q8N2Q7 840 aa30.74■■■□□ 2.51
APOE-202ENST00000425718 MRPL50Q8N5N7 158 aaKnown RBP30.74■■■□□ 2.51
APOE-202ENST00000425718 TCERG1O14776 1098 aaKnown RBP30.73■■■□□ 2.51
APOE-202ENST00000425718 ARFGEF2Q9Y6D5 1785 aa30.73■■■□□ 2.51
APOE-202ENST00000425718 ANKRD36CQ5JPF3 1778 aa30.72■■■□□ 2.51
APOE-202ENST00000425718 PSDA5PKW4 1024 aaPredicted RBP30.72■■■□□ 2.51
APOE-202ENST00000425718 CAMTA2O94983 1202 aa30.72■■■□□ 2.51
APOE-202ENST00000425718 TTLL7Q6ZT98 887 aa30.72■■■□□ 2.51
APOE-202ENST00000425718 PHAXQ9H814 394 aaKnown RBP30.72■■■□□ 2.51
APOE-202ENST00000425718 IPO8O15397 1037 aaKnown RBP30.71■■■□□ 2.51
APOE-202ENST00000425718 FKBP5Q13451 457 aaPredicted RBP30.71■■■□□ 2.51
APOE-202ENST00000425718 USPL1Q5W0Q7 1092 aa30.71■■■□□ 2.51
APOE-202ENST00000425718 RIC3Q7Z5B4 369 aa30.71■■■□□ 2.51
APOE-202ENST00000425718 MTFR1LQ9H019 292 aa30.71■■■□□ 2.51
APOE-202ENST00000425718 RCAN3Q9UKA8 241 aa30.71■■■□□ 2.51
APOE-202ENST00000425718 GIGYF2Q6Y7W6 1299 aaKnown RBP30.7■■■□□ 2.51
APOE-202ENST00000425718 COL24A1Q17RW2 1714 aa30.7■■■□□ 2.5
APOE-202ENST00000425718 GYS1P13807 737 aa30.69■■■□□ 2.5
APOE-202ENST00000425718 KSR2Q6VAB6 950 aa30.69■■■□□ 2.5
APOE-202ENST00000425718 SMIM5Q71RC9 77 aa30.68■■■□□ 2.5
APOE-202ENST00000425718 ZBTB3Q9H5J0 574 aa30.68■■■□□ 2.5
APOE-202ENST00000425718 SRP68Q9UHB9 627 aaKnown RBP30.68■■■□□ 2.5
APOE-202ENST00000425718 ARHGAP45Q92619 1136 aa30.67■■■□□ 2.5
APOE-202ENST00000425718 BCL2L13Q9BXK5 485 aa30.67■■■□□ 2.5
APOE-202ENST00000425718 ATP10DQ9P241 1426 aa30.66■■■□□ 2.5
APOE-202ENST00000425718 NEXNQ0ZGT2 675 aa30.66■■■□□ 2.5
APOE-202ENST00000425718 G2E3Q7L622 706 aa30.66■■■□□ 2.5
APOE-202ENST00000425718 API5Q9BZZ5 524 aaKnown RBP30.65■■■□□ 2.5
APOE-202ENST00000425718 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.64■■■□□ 2.5
APOE-202ENST00000425718 PI4KAP2A4QPH2 592 aa30.63■■■□□ 2.49
APOE-202ENST00000425718 POLD1P28340 1107 aa30.63■■■□□ 2.49
APOE-202ENST00000425718 PI4KAP1Q8N8J0 262 aa30.63■■■□□ 2.49
APOE-202ENST00000425718 DNAAF4Q8WXU2 420 aa30.63■■■□□ 2.49
APOE-202ENST00000425718 TCIRG1Q13488 830 aa30.62■■■□□ 2.49
APOE-202ENST00000425718 PARP10Q53GL7 1025 aa30.62■■■□□ 2.49
APOE-202ENST00000425718 SETDB2Q96T68 719 aa30.62■■■□□ 2.49
APOE-202ENST00000425718 BCL2L12Q9HB09 334 aa30.62■■■□□ 2.49
APOE-202ENST00000425718 MAP3K2Q9Y2U5 619 aa30.62■■■□□ 2.49
APOE-202ENST00000425718 AFDNP55196 1824 aaKnown RBP30.61■■■□□ 2.49
APOE-202ENST00000425718 FKBP8Q14318 412 aa30.61■■■□□ 2.49
APOE-202ENST00000425718 METTL22Q9BUU2 404 aaPredicted RBP30.61■■■□□ 2.49
APOE-202ENST00000425718 SPON1Q9HCB6 807 aa30.61■■■□□ 2.49
APOE-202ENST00000425718 NOB1Q9ULX3 412 aaKnown RBP30.61■■■□□ 2.49
APOE-202ENST00000425718 PXDNLA1KZ92 1463 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 ADCY9O60503 1353 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 BCAR3O75815 825 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 MS4A1P11836 297 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 HLFQ16534 295 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 CARMIL3Q8ND23 1372 aa30.6■■■□□ 2.49
APOE-202ENST00000425718 PDGFDQ9GZP0 370 aaPredicted RBP30.6■■■□□ 2.49
APOE-202ENST00000425718 N4BP2Q86UW6 1770 aaPredicted RBP30.59■■■□□ 2.49
APOE-202ENST00000425718 ZBTB7AO95365 584 aa30.59■■■□□ 2.49
APOE-202ENST00000425718 ZKSCAN2Q63HK3 967 aa30.59■■■□□ 2.49
APOE-202ENST00000425718 NIP7Q9Y221 180 aaKnown RBP eCLIP30.59■■■□□ 2.491e-12■□□□□ 8.6
APOE-202ENST00000425718 PARP3Q9Y6F1 533 aa30.59■■■□□ 2.49
APOE-202ENST00000425718 TRIM28Q13263 835 aaKnown RBP30.58■■■□□ 2.49
APOE-202ENST00000425718 IBTKQ9P2D0 1353 aaPredicted RBP30.57■■■□□ 2.48
APOE-202ENST00000425718 TM4SF1P30408 202 aa30.57■■■□□ 2.48
APOE-202ENST00000425718 TBC1D9BQ66K14 1250 aa30.57■■■□□ 2.48
APOE-202ENST00000425718 PPP1R42Q7Z4L9 355 aa30.57■■■□□ 2.48
APOE-202ENST00000425718 ZNF34Q8IZ26 560 aa30.57■■■□□ 2.48
APOE-202ENST00000425718 NYXQ9GZU5 481 aa30.57■■■□□ 2.48
APOE-202ENST00000425718 RNF123Q5XPI4 1314 aa30.56■■■□□ 2.48
APOE-202ENST00000425718 NFIXQ14938 502 aa30.56■■■□□ 2.48
APOE-202ENST00000425718 MSL1Q68DK7 614 aa30.56■■■□□ 2.48
APOE-202ENST00000425718 ATF7IPQ6VMQ6 1270 aa30.56■■■□□ 2.48
APOE-202ENST00000425718 FRAT1Q92837 279 aaPredicted RBP30.56■■■□□ 2.48
APOE-202ENST00000425718 MMP10P09238 476 aa30.55■■■□□ 2.48
APOE-202ENST00000425718 CCDC191Q8NCU4 936 aa30.55■■■□□ 2.48
APOE-202ENST00000425718 MYD88Q99836 296 aa30.55■■■□□ 2.48
APOE-202ENST00000425718 ISCA1Q9BUE6 129 aa30.55■■■□□ 2.48
APOE-202ENST00000425718 LINS1Q8NG48 757 aa30.54■■■□□ 2.48
APOE-202ENST00000425718 BICDL1Q6ZP65 573 aa30.53■■■□□ 2.48
APOE-202ENST00000425718 ATF5Q9Y2D1 282 aaPredicted RBP30.53■■■□□ 2.48
APOE-202ENST00000425718 NRXN2Q9P2S2 1712 aa30.53■■■□□ 2.48
APOE-202ENST00000425718 CENPBP07199 599 aaPredicted RBP30.52■■■□□ 2.48
APOE-202ENST00000425718 TPTE2Q6XPS3 522 aa30.52■■■□□ 2.48
APOE-202ENST00000425718 NPHP1O15259 732 aa30.51■■■□□ 2.47
APOE-202ENST00000425718 ALDH1L1O75891 902 aa30.51■■■□□ 2.47
APOE-202ENST00000425718 HSP90B1P14625 803 aaKnown RBP30.51■■■□□ 2.47
APOE-202ENST00000425718 CCT4P50991 539 aaKnown RBP30.51■■■□□ 2.47
APOE-202ENST00000425718 SLC4A10Q6U841 1118 aa30.51■■■□□ 2.47
APOE-202ENST00000425718 CWC25Q9NXE8 425 aaPredicted RBP30.51■■■□□ 2.47
APOE-202ENST00000425718 F6X3S4 739 aa30.5■■■□□ 2.47
APOE-202ENST00000425718 POLRMTO00411 1230 aaKnown RBP30.5■■■□□ 2.47
APOE-202ENST00000425718 GPTP24298 496 aa30.5■■■□□ 2.47
APOE-202ENST00000425718 NLRP10Q86W26 655 aa30.5■■■□□ 2.47
APOE-202ENST00000425718 NBPF5PQ86XG9 351 aaPredicted RBP30.5■■■□□ 2.47
APOE-202ENST00000425718 FTSJ3Q8IY81 847 aaKnown RBP30.5■■■□□ 2.47
APOE-202ENST00000425718 SRCIN1Q9C0H9 1055 aa30.5■■■□□ 2.47
APOE-202ENST00000425718 SERPINB2P05120 415 aa30.49■■■□□ 2.47
APOE-202ENST00000425718 UTP14AQ9BVJ6 771 aaKnown RBP30.49■■■□□ 2.47
APOE-202ENST00000425718 TRIM27P14373 513 aa30.48■■■□□ 2.47
APOE-202ENST00000425718 ABCC4O15439 1325 aa30.47■■■□□ 2.47
APOE-202ENST00000425718 LRP5O75197 1615 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms