RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CABP4P57796 275 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 LMOD3Q0VAK6 560 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 TAF7Q15545 349 aaPredicted RBP9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SPNS2Q8IVW8 549 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 ASAP1Q9ULH1 1129 aa9.27□□□□□ -0.93
CHCHD3P1-201ENST00000425516 TNS1Q9HBL0 1735 aaKnown RBP9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 TEFQ10587 303 aa9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SYTL4Q96C24 671 aaPredicted RBP9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SIPA1L3O60292 1781 aaPredicted RBP9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 VIRMAQ69YN4 1812 aaKnown RBP9.26□□□□□ -0.93
CHCHD3P1-201ENST00000425516 CHL1O00533 1208 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 APBA3O96018 575 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 WDR63Q8IWG1 891 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 BABAM1Q9NWV8 329 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 BTAF1O14981 1849 aa9.25□□□□□ -0.93
CHCHD3P1-201ENST00000425516 BTBD11A6QL63 1104 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 KCNQ3O43525 872 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 ZNF790Q6PG37 636 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 DEFB132Q7Z7B7 95 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SLC4A9Q96Q91 983 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 MIS18AQ9NYP9 233 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 IL16Q14005 1332 aa9.24□□□□□ -0.93
CHCHD3P1-201ENST00000425516 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
CHCHD3P1-201ENST00000425516 EN1Q05925 392 aaPredicted RBP9.23□□□□□ -0.93
CHCHD3P1-201ENST00000425516 LRRC4BQ9NT99 713 aa9.23□□□□□ -0.93
CHCHD3P1-201ENST00000425516 PALLDQ8WX93 1383 aa9.23□□□□□ -0.93
CHCHD3P1-201ENST00000425516 HEG1Q9ULI3 1381 aa9.23□□□□□ -0.93
CHCHD3P1-201ENST00000425516 KAT6BQ8WYB5 2073 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 LOC102724428A0A0B4J2F2 783 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SOCS7O14512 581 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 EVI5O60447 810 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 BAG6P46379 1132 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SIK1P57059 783 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 CALD1Q05682 793 aaKnown RBP9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 EZH2Q15910 746 aaKnown RBP9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 ZNF496Q96IT1 587 aaPredicted RBP9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 IFT57Q9NWB7 429 aa9.22□□□□□ -0.93
CHCHD3P1-201ENST00000425516 DPYSL4O14531 572 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 PTCD1O75127 700 aaKnown RBP9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 GNAI1P63096 354 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TXNRD1Q16881 649 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TRMT2AQ8IZ69 625 aaKnown RBP9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TSPYL4Q9UJ04 414 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 LY75O60449 1722 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 RGPD3A6NKT7 1758 aaPredicted RBP9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 RGPD4Q7Z3J3 1758 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 UBR2Q8IWV8 1755 aa9.21□□□□□ -0.94
CHCHD3P1-201ENST00000425516 KDM3BQ7LBC6 1761 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 KCNQ4P56696 695 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ITPK1Q13572 414 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 LAS1LQ9Y4W2 734 aaKnown RBP9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TBC1D12O60347 775 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 PSEN2P49810 448 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 DMRTA1Q5VZB9 504 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TTC5Q8N0Z6 440 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 FMNL2Q96PY5 1086 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CCNL1Q9UK58 526 aaPredicted RBP9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ZBED9Q6R2W3 1325 aa9.19□□□□□ -0.94
CHCHD3P1-201ENST00000425516 PRAMEF22A3QJZ6 481 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ATP6V1AP38606 617 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 MAP3K9P80192 1104 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 DNAJC10Q8IXB1 793 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 LINC00116Q8NCU8 138 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 RREB1Q92766 1687 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TSR2Q969E8 191 aaKnown RBP9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CICQ96RK0 1608 aaPredicted RBP9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
CHCHD3P1-201ENST00000425516 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 E9PSI1 815 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 SNRPA1P09661 255 aaKnown RBP9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CYP19A1P11511 503 aaPredicted RBP9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ZNF454Q8N9F8 522 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 C8orf58Q8NAV2 365 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TJP1Q07157 1748 aa9.17□□□□□ -0.94
CHCHD3P1-201ENST00000425516 HOXB7P09629 217 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms