RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
CALD1-206ENST00000424922 NUP188Q5SRE5 1749 aa18.78■□□□□ 0.6
CALD1-206ENST00000424922 EP400Q96L91 3159 aa18.78■□□□□ 0.6
CALD1-206ENST00000424922 MYH14Q7Z406 1995 aaKnown RBP18.78■□□□□ 0.6
CALD1-206ENST00000424922 CICQ96RK0 1608 aaPredicted RBP18.77■□□□□ 0.6
CALD1-206ENST00000424922 KRT27Q7Z3Y8 459 aa18.77■□□□□ 0.6
CALD1-206ENST00000424922 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
CALD1-206ENST00000424922 ZNF330Q9Y3S2 320 aaPredicted RBP18.77■□□□□ 0.6
CALD1-206ENST00000424922 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
CALD1-206ENST00000424922 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
CALD1-206ENST00000424922 NPM2Q86SE8 214 aaKnown RBP18.77■□□□□ 0.6
CALD1-206ENST00000424922 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
CALD1-206ENST00000424922 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
CALD1-206ENST00000424922 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
CALD1-206ENST00000424922 GNAI3P08754 354 aa18.76■□□□□ 0.59
CALD1-206ENST00000424922 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
CALD1-206ENST00000424922 PLBD2Q8NHP8 589 aa18.76■□□□□ 0.59
CALD1-206ENST00000424922 RGS3P49796 1198 aa18.75■□□□□ 0.59
CALD1-206ENST00000424922 ITPK1Q13572 414 aa18.75■□□□□ 0.59
CALD1-206ENST00000424922 LINS1Q8NG48 757 aa18.75■□□□□ 0.59
CALD1-206ENST00000424922 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
CALD1-206ENST00000424922 RXRBP28702 533 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 NEXNQ0ZGT2 675 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 MYD88Q99836 296 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 GNAI2P04899 355 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
CALD1-206ENST00000424922 LY75O60449 1722 aa18.74■□□□□ 0.59
CALD1-206ENST00000424922 IGKV5-2P06315 115 aa18.73■□□□□ 0.59
CALD1-206ENST00000424922 UBTFL1P0CB47 393 aaPredicted RBP18.73■□□□□ 0.59
CALD1-206ENST00000424922 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
CALD1-206ENST00000424922 ANO8Q9HCE9 1232 aaPredicted RBP18.73■□□□□ 0.59
CALD1-206ENST00000424922 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
CALD1-206ENST00000424922 RREB1Q92766 1687 aa18.72■□□□□ 0.59
CALD1-206ENST00000424922 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
CALD1-206ENST00000424922 CRKLP46109 303 aaKnown RBP18.72■□□□□ 0.59
CALD1-206ENST00000424922 KCNQ4P56696 695 aa18.72■□□□□ 0.59
CALD1-206ENST00000424922 CEP85Q6P2H3 762 aa18.72■□□□□ 0.59
CALD1-206ENST00000424922 ARXQ96QS3 562 aa18.72■□□□□ 0.59
CALD1-206ENST00000424922 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
CALD1-206ENST00000424922 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
CALD1-206ENST00000424922 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
CALD1-206ENST00000424922 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
CALD1-206ENST00000424922 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
CALD1-206ENST00000424922 C9orf78Q9NZ63 289 aaPredicted RBP18.71■□□□□ 0.59
CALD1-206ENST00000424922 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
CALD1-206ENST00000424922 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
CALD1-206ENST00000424922 NUP98P52948 1817 aa18.71■□□□□ 0.59
CALD1-206ENST00000424922 TAF1LQ8IZX4 1826 aa18.71■□□□□ 0.59
CALD1-206ENST00000424922 ATP5J2-PTCD1G3V325 749 aa18.7■□□□□ 0.58
CALD1-206ENST00000424922 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
CALD1-206ENST00000424922 KIF6Q6ZMV9 814 aa18.7■□□□□ 0.58
CALD1-206ENST00000424922 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
CALD1-206ENST00000424922 GCKRQ14397 625 aa18.68■□□□□ 0.58
CALD1-206ENST00000424922 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
CALD1-206ENST00000424922 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
CALD1-206ENST00000424922 GRM8O00222 908 aa18.68■□□□□ 0.58
CALD1-206ENST00000424922 TRIM37O94972 964 aa18.68■□□□□ 0.58
CALD1-206ENST00000424922 CCNL1Q9UK58 526 aaPredicted RBP18.67■□□□□ 0.58
CALD1-206ENST00000424922 PDZRN3Q9UPQ7 1066 aa18.67■□□□□ 0.58
CALD1-206ENST00000424922 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
CALD1-206ENST00000424922 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
CALD1-206ENST00000424922 MAP3K15Q6ZN16 1313 aa18.67■□□□□ 0.58
CALD1-206ENST00000424922 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
CALD1-206ENST00000424922 IBTKQ9P2D0 1353 aaPredicted RBP18.65■□□□□ 0.58
CALD1-206ENST00000424922 UTYO14607 1347 aa18.65■□□□□ 0.58
CALD1-206ENST00000424922 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
CALD1-206ENST00000424922 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
CALD1-206ENST00000424922 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
CALD1-206ENST00000424922 HMMRO75330 724 aa18.65■□□□□ 0.58
CALD1-206ENST00000424922 PNMA6EA0A0J9YXQ4 647 aa18.64■□□□□ 0.57
CALD1-206ENST00000424922 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
CALD1-206ENST00000424922 HLFQ16534 295 aa18.64■□□□□ 0.57
CALD1-206ENST00000424922 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
CALD1-206ENST00000424922 DCTPP1Q9H773 170 aa18.64■□□□□ 0.57
CALD1-206ENST00000424922 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
CALD1-206ENST00000424922 A0A087WZG4 1122 aa18.63■□□□□ 0.57
CALD1-206ENST00000424922 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
CALD1-206ENST00000424922 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
CALD1-206ENST00000424922 CWC25Q9NXE8 425 aaPredicted RBP18.63■□□□□ 0.57
CALD1-206ENST00000424922 CNTNAP4Q9C0A0 1308 aa18.63■□□□□ 0.57
CALD1-206ENST00000424922 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
CALD1-206ENST00000424922 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
CALD1-206ENST00000424922 CCDC191Q8NCU4 936 aa18.62■□□□□ 0.57
CALD1-206ENST00000424922 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
CALD1-206ENST00000424922 ERVV-1B6SEH8 477 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 NUCB1Q02818 461 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 COL15A1P39059 1388 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
CALD1-206ENST00000424922 SRGAP3O43295 1099 aa18.6■□□□□ 0.57
CALD1-206ENST00000424922 RC3H1Q5TC82 1133 aaKnown RBP18.6■□□□□ 0.57
CALD1-206ENST00000424922 BICC1Q9H694 974 aaKnown RBP18.6■□□□□ 0.57
CALD1-206ENST00000424922 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
CALD1-206ENST00000424922 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
CALD1-206ENST00000424922 RTL5Q5HYW3 569 aaPredicted RBP18.59■□□□□ 0.57
CALD1-206ENST00000424922 SSH3Q8TE77 659 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms