RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 CLEC4GQ6UXB4 293 aa26.46■■□□□ 1.83
PMS1-211ENST00000424766 SCN7AQ01118 1682 aa26.46■■□□□ 1.83
PMS1-211ENST00000424766 NUP98P52948 1817 aa26.46■■□□□ 1.83
PMS1-211ENST00000424766 MAP3K15Q6ZN16 1313 aa26.45■■□□□ 1.83
PMS1-211ENST00000424766 TCERG1O14776 1098 aaKnown RBP26.45■■□□□ 1.82
PMS1-211ENST00000424766 SLC4A2P04920 1241 aa26.45■■□□□ 1.82
PMS1-211ENST00000424766 AIMP1Q12904 312 aaKnown RBP26.45■■□□□ 1.82
PMS1-211ENST00000424766 FKBP8Q14318 412 aa26.45■■□□□ 1.82
PMS1-211ENST00000424766 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
PMS1-211ENST00000424766 SGIP1Q9BQI5 828 aa26.44■■□□□ 1.82
PMS1-211ENST00000424766 ZNF652Q9Y2D9 606 aa26.44■■□□□ 1.82
PMS1-211ENST00000424766 POLD1P28340 1107 aa26.43■■□□□ 1.82
PMS1-211ENST00000424766 TM4SF1P30408 202 aa26.43■■□□□ 1.82
PMS1-211ENST00000424766 PTGER2P43116 358 aa26.43■■□□□ 1.82
PMS1-211ENST00000424766 PHAXQ9H814 394 aaKnown RBP26.43■■□□□ 1.82
PMS1-211ENST00000424766 HLFQ16534 295 aa26.41■■□□□ 1.82
PMS1-211ENST00000424766 ALDH1L2Q3SY69 923 aa26.41■■□□□ 1.82
PMS1-211ENST00000424766 ANKRD13DQ6ZTN6 518 aa26.41■■□□□ 1.82
PMS1-211ENST00000424766 PLBD2Q8NHP8 589 aa26.41■■□□□ 1.82
PMS1-211ENST00000424766 YTHDC1Q96MU7 727 aaKnown RBP26.41■■□□□ 1.82
PMS1-211ENST00000424766 GIGYF2Q6Y7W6 1299 aaKnown RBP26.4■■□□□ 1.82
PMS1-211ENST00000424766 ZBTB3Q9H5J0 574 aa26.4■■□□□ 1.82
PMS1-211ENST00000424766 DDX58O95786 925 aaKnown RBP26.39■■□□□ 1.82
PMS1-211ENST00000424766 MMP10P09238 476 aa26.39■■□□□ 1.82
PMS1-211ENST00000424766 LRP5O75197 1615 aa26.39■■□□□ 1.81
PMS1-211ENST00000424766 NFIXQ14938 502 aa26.38■■□□□ 1.81
PMS1-211ENST00000424766 TBC1D9BQ66K14 1250 aa26.38■■□□□ 1.81
PMS1-211ENST00000424766 G2E3Q7L622 706 aa26.37■■□□□ 1.81
PMS1-211ENST00000424766 SSH1Q8WYL5 1049 aa26.37■■□□□ 1.81
PMS1-211ENST00000424766 PARP3Q9Y6F1 533 aa26.37■■□□□ 1.81
PMS1-211ENST00000424766 FLIIQ13045 1269 aa26.36■■□□□ 1.81
PMS1-211ENST00000424766 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
PMS1-211ENST00000424766 SETDB2Q96T68 719 aa26.36■■□□□ 1.81
PMS1-211ENST00000424766 HSP90AB3PQ58FF7 597 aa26.35■■□□□ 1.81
PMS1-211ENST00000424766 RIC3Q7Z5B4 369 aa26.35■■□□□ 1.81
PMS1-211ENST00000424766 ARFGEF2Q9Y6D5 1785 aa26.34■■□□□ 1.81
PMS1-211ENST00000424766 POLRMTO00411 1230 aaKnown RBP26.34■■□□□ 1.81
PMS1-211ENST00000424766 RARSP54136 660 aaKnown RBP26.34■■□□□ 1.81
PMS1-211ENST00000424766 BRPF1P55201 1214 aaPredicted RBP26.34■■□□□ 1.81
PMS1-211ENST00000424766 TCIRG1Q13488 830 aa26.34■■□□□ 1.81
PMS1-211ENST00000424766 KSR2Q6VAB6 950 aa26.34■■□□□ 1.81
PMS1-211ENST00000424766 BICDL1Q6ZP65 573 aa26.34■■□□□ 1.81
PMS1-211ENST00000424766 ANKRD36CQ5JPF3 1778 aa26.33■■□□□ 1.81
PMS1-211ENST00000424766 ATP10DQ9P241 1426 aa26.33■■□□□ 1.81
PMS1-211ENST00000424766 DDR1Q08345 913 aa26.33■■□□□ 1.81
PMS1-211ENST00000424766 ZNF34Q8IZ26 560 aa26.33■■□□□ 1.81
PMS1-211ENST00000424766 NIP7Q9Y221 180 aaKnown RBP eCLIP26.33■■□□□ 1.81
PMS1-211ENST00000424766 AFDNP55196 1824 aaKnown RBP26.32■■□□□ 1.8
PMS1-211ENST00000424766 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
PMS1-211ENST00000424766 PI4KAP2A4QPH2 592 aa26.31■■□□□ 1.8
PMS1-211ENST00000424766 SERPINB2P05120 415 aa26.31■■□□□ 1.8
PMS1-211ENST00000424766 FKBP5Q13451 457 aaPredicted RBP26.31■■□□□ 1.8
PMS1-211ENST00000424766 PI4KAP1Q8N8J0 262 aa26.31■■□□□ 1.8
PMS1-211ENST00000424766 PPP1R1BQ9UD71 204 aaPredicted RBP26.31■■□□□ 1.8
PMS1-211ENST00000424766 CARMIL3Q8ND23 1372 aa26.31■■□□□ 1.8
PMS1-211ENST00000424766 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
PMS1-211ENST00000424766 NRXN2Q9P2S2 1712 aa26.3■■□□□ 1.8
PMS1-211ENST00000424766 PARP10Q53GL7 1025 aa26.29■■□□□ 1.8
PMS1-211ENST00000424766 METTL22Q9BUU2 404 aaPredicted RBP26.29■■□□□ 1.8
PMS1-211ENST00000424766 BCL2L13Q9BXK5 485 aa26.29■■□□□ 1.8
PMS1-211ENST00000424766 TRIM28Q13263 835 aaKnown RBP26.28■■□□□ 1.8
PMS1-211ENST00000424766 PTPRCP08575 1304 aa26.28■■□□□ 1.8
PMS1-211ENST00000424766 ADCY9O60503 1353 aa26.28■■□□□ 1.8
PMS1-211ENST00000424766 GPTP24298 496 aa26.27■■□□□ 1.8
PMS1-211ENST00000424766 ISCA1Q9BUE6 129 aa26.27■■□□□ 1.8
PMS1-211ENST00000424766 UBN2Q6ZU65 1347 aa26.26■■□□□ 1.79
PMS1-211ENST00000424766 TPTE2Q6XPS3 522 aa26.26■■□□□ 1.79
PMS1-211ENST00000424766 PPP1R42Q7Z4L9 355 aa26.25■■□□□ 1.79
PMS1-211ENST00000424766 NBPF5PQ86XG9 351 aaPredicted RBP26.25■■□□□ 1.79
PMS1-211ENST00000424766 DNAAF4Q8WXU2 420 aa26.25■■□□□ 1.79
PMS1-211ENST00000424766 NYXQ9GZU5 481 aa26.25■■□□□ 1.79
PMS1-211ENST00000424766 KIF13BQ9NQT8 1826 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 NEXNQ0ZGT2 675 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 SUSD4Q5VX71 490 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 NLRP10Q86W26 655 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 MYD88Q99836 296 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 CD2APQ9Y5K6 639 aa26.24■■□□□ 1.79
PMS1-211ENST00000424766 IBTKQ9P2D0 1353 aaPredicted RBP26.23■■□□□ 1.79
PMS1-211ENST00000424766 ATP5J2-PTCD1G3V325 749 aa26.23■■□□□ 1.79
PMS1-211ENST00000424766 KIF16BQ96L93 1317 aa26.22■■□□□ 1.79
PMS1-211ENST00000424766 BCAR3O75815 825 aa26.22■■□□□ 1.79
PMS1-211ENST00000424766 PRR5LQ6MZQ0 368 aa26.22■■□□□ 1.79
PMS1-211ENST00000424766 CNBD1Q8NA66 436 aa26.22■■□□□ 1.79
PMS1-211ENST00000424766 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
PMS1-211ENST00000424766 FAM177BA6PVY3 158 aa26.21■■□□□ 1.79
PMS1-211ENST00000424766 F6X3S4 739 aa26.21■■□□□ 1.79
PMS1-211ENST00000424766 NPHP1O15259 732 aa26.21■■□□□ 1.79
PMS1-211ENST00000424766 CCDC191Q8NCU4 936 aa26.21■■□□□ 1.79
PMS1-211ENST00000424766 ARHGAP45Q92619 1136 aa26.21■■□□□ 1.79
PMS1-211ENST00000424766 UTP14AQ9BVJ6 771 aaKnown RBP26.21■■□□□ 1.79
PMS1-211ENST00000424766 FHDC1Q9C0D6 1143 aaPredicted RBP26.21■■□□□ 1.79
PMS1-211ENST00000424766 RNF123Q5XPI4 1314 aa26.2■■□□□ 1.79
PMS1-211ENST00000424766 IPO8O15397 1037 aaKnown RBP26.2■■□□□ 1.78
PMS1-211ENST00000424766 NTSR2O95665 410 aa26.2■■□□□ 1.78
PMS1-211ENST00000424766 C10orf71Q711Q0 1435 aa26.2■■□□□ 1.78
PMS1-211ENST00000424766 IGKV5-2P06315 115 aa26.19■■□□□ 1.78
PMS1-211ENST00000424766 GTF2E1P29083 439 aaPredicted RBP26.19■■□□□ 1.78
PMS1-211ENST00000424766 ST5P78524 1137 aa26.19■■□□□ 1.78
PMS1-211ENST00000424766 LINS1Q8NG48 757 aa26.19■■□□□ 1.78
PMS1-211ENST00000424766 SYT17Q9BSW7 474 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms