RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 NPHP1O15259 732 aa15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 NBPF10Q6P3W6 841 aaKnown RBP15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 NBPF15Q8N660 670 aa15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
TRBV22-1-201ENST00000424543 PDE6BP35913 854 aa15.58■□□□□ 0.08
TRBV22-1-201ENST00000424543 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
TRBV22-1-201ENST00000424543 GLTPD2A6NH11 291 aa15.57■□□□□ 0.08
TRBV22-1-201ENST00000424543 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
TRBV22-1-201ENST00000424543 POTECB2RU33 542 aa15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 SNRPA1P09661 255 aaKnown RBP15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 ST5P78524 1137 aa15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 FSTL1Q12841 308 aa15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 PRPF40BQ6NWY9 871 aaKnown RBP15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 OLFM4Q6UX06 510 aa15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 ZC3H4Q9UPT8 1303 aaKnown RBP15.56■□□□□ 0.08
TRBV22-1-201ENST00000424543 SRGNP10124 158 aa15.55■□□□□ 0.08
TRBV22-1-201ENST00000424543 HLFQ16534 295 aa15.55■□□□□ 0.08
TRBV22-1-201ENST00000424543 NBPF5PQ86XG9 351 aaPredicted RBP15.55■□□□□ 0.08
TRBV22-1-201ENST00000424543 NGEFQ8N5V2 710 aa15.55■□□□□ 0.08
TRBV22-1-201ENST00000424543 SMC1BQ8NDV3 1235 aa15.55■□□□□ 0.08
TRBV22-1-201ENST00000424543 ERFEQ4G0M1 354 aa15.54■□□□□ 0.08
TRBV22-1-201ENST00000424543 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
TRBV22-1-201ENST00000424543 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
TRBV22-1-201ENST00000424543 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRBV22-1-201ENST00000424543 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
TRBV22-1-201ENST00000424543 STYK1Q6J9G0 422 aa15.53■□□□□ 0.08
TRBV22-1-201ENST00000424543 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
TRBV22-1-201ENST00000424543 MASTLQ96GX5 879 aa15.53■□□□□ 0.08
TRBV22-1-201ENST00000424543 ABCC12Q96J65 1359 aa15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 DDNO94850 711 aaPredicted RBP15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 TAF7Q15545 349 aaPredicted RBP15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 CNKSR1Q969H4 720 aa15.52■□□□□ 0.08
TRBV22-1-201ENST00000424543 PLEKHF1Q96S99 279 aa15.51■□□□□ 0.07
TRBV22-1-201ENST00000424543 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
TRBV22-1-201ENST00000424543 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
TRBV22-1-201ENST00000424543 PDZRN3Q9UPQ7 1066 aa15.5■□□□□ 0.07
TRBV22-1-201ENST00000424543 ZNF652Q9Y2D9 606 aa15.5■□□□□ 0.07
TRBV22-1-201ENST00000424543 LTBP3Q9NS15 1303 aa15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 MYL6BP14649 208 aa15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 CLEC4GQ6UXB4 293 aa15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 C7orf43Q8WVR3 580 aa15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 ZNF277Q9NRM2 450 aaPredicted RBP15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
TRBV22-1-201ENST00000424543 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 COL4A5P29400 1685 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 SCN4AP35499 1836 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 GPTP24298 496 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 JMYQ8N9B5 988 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
TRBV22-1-201ENST00000424543 LAMB2P55268 1798 aa15.47■□□□□ 0.07
TRBV22-1-201ENST00000424543 NPR1P16066 1061 aa15.47■□□□□ 0.07
TRBV22-1-201ENST00000424543 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
TRBV22-1-201ENST00000424543 DPY19L2Q6NUT2 758 aa15.47■□□□□ 0.07
TRBV22-1-201ENST00000424543 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
TRBV22-1-201ENST00000424543 UBN2Q6ZU65 1347 aa15.46■□□□□ 0.07
TRBV22-1-201ENST00000424543 COL13A1Q5TAT6 717 aaPredicted RBP15.46■□□□□ 0.07
TRBV22-1-201ENST00000424543 TPTE2Q6XPS3 522 aa15.46■□□□□ 0.07
TRBV22-1-201ENST00000424543 TAF1P21675 1872 aa15.46■□□□□ 0.06
TRBV22-1-201ENST00000424543 MAP3K15Q6ZN16 1313 aa15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 ANXA1P04083 346 aa15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 NEFMP07197 916 aa15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
TRBV22-1-201ENST00000424543 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 LTBP1Q14766 1721 aa15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 ADAMTSL1Q8N6G6 1762 aa15.44■□□□□ 0.06
TRBV22-1-201ENST00000424543 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 SUSD4Q5VX71 490 aa15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 KIF6Q6ZMV9 814 aa15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 MKRN1Q9UHC7 482 aaKnown RBP15.43■□□□□ 0.06
TRBV22-1-201ENST00000424543 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 SYNE4Q8N205 404 aa15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
TRBV22-1-201ENST00000424543 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
TRBV22-1-201ENST00000424543 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
TRBV22-1-201ENST00000424543 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
TRBV22-1-201ENST00000424543 TAF1DQ9H5J8 278 aaPredicted RBP15.41■□□□□ 0.06
TRBV22-1-201ENST00000424543 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
TRBV22-1-201ENST00000424543 ERVV-1B6SEH8 477 aa15.4■□□□□ 0.06
TRBV22-1-201ENST00000424543 CAPN15O75808 1086 aa15.4■□□□□ 0.06
TRBV22-1-201ENST00000424543 NTSR2O95665 410 aa15.4■□□□□ 0.06
TRBV22-1-201ENST00000424543 RIPK4P57078 832 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms