RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.99□□□□□ -1.61
PMS1-209ENST00000424059 ZDHHC1Q8WTX9 485 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 PRR12Q9ULL5 1215 aa4.99□□□□□ -1.61
PMS1-209ENST00000424059 SERTM1A2A2V5 107 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 SPDYE3A6NKU9 549 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 PSMA6P60900 246 aaKnown RBP4.98□□□□□ -1.61
PMS1-209ENST00000424059 GRIN2CQ14957 1233 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 FCHSD1Q86WN1 690 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 LARGE2Q8N3Y3 721 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 L3MBTL2Q969R5 705 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 NEUROD4Q9HD90 331 aa4.98□□□□□ -1.61
PMS1-209ENST00000424059 USP17L3A6NCW0 530 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 USP17L4A6NCW7 530 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ATP9BO43861 1147 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 SIN3BO75182 1162 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 TXLNAP40222 546 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 BAG6P46379 1132 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 HIF1AQ16665 826 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 USP17L2Q6R6M4 530 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 USP17L1Q7RTZ2 530 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ANKIB1Q9P2G1 1089 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 KLF15Q9UIH9 416 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ELOA3CA0A087WX78 387 aaPredicted RBP4.97□□□□□ -1.61
PMS1-209ENST00000424059 PALM3A6NDB9 673 aaPredicted RBP4.97□□□□□ -1.61
PMS1-209ENST00000424059 ELOA3DA6NLF2 546 aaPredicted RBP4.97□□□□□ -1.61
PMS1-209ENST00000424059 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 K7ELQ4 463 aaPredicted RBP4.97□□□□□ -1.61
PMS1-209ENST00000424059 NEUROD1Q13562 356 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ELOA3BQ3SY89 546 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 SIX5Q8N196 739 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 STAG2Q8N3U4 1231 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ELOA3Q8NG57 546 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 GAS2L2Q8NHY3 880 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 POM121Q96HA1 1249 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 MDFIQ99750 246 aa4.97□□□□□ -1.61
PMS1-209ENST00000424059 ALAS2P22557 587 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 CCDC102BQ68D86 513 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 TPCN2Q8NHX9 752 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 RHPN1Q8TCX5 695 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 SUV39H2Q9H5I1 410 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 ZNF232Q9UNY5 417 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 RBM19Q9Y4C8 960 aaKnown RBP4.96□□□□□ -1.62
PMS1-209ENST00000424059 ZBTB7BO15156 539 aaPredicted RBP4.96□□□□□ -1.62
PMS1-209ENST00000424059 KCNQ4P56696 695 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 EFCC1Q9HA90 598 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 PRDM6Q9NQX0 595 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 HCN2Q9UL51 889 aa4.96□□□□□ -1.62
PMS1-209ENST00000424059 SPATA31C1P0DKV0 1188 aa4.95□□□□□ -1.62
PMS1-209ENST00000424059 TNS4Q8IZW8 715 aa4.95□□□□□ -1.62
PMS1-209ENST00000424059 C7orf43Q8WVR3 580 aa4.95□□□□□ -1.62
PMS1-209ENST00000424059 TNFRSF25Q93038 417 aa4.95□□□□□ -1.62
PMS1-209ENST00000424059 STRN4Q9NRL3 753 aa4.95□□□□□ -1.62
PMS1-209ENST00000424059 LRRC69Q6ZNQ3 347 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 DEPDC4Q8N2C3 294 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 ADAMTS19Q8TE59 1207 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 UCN2Q96RP3 112 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 PARP3Q9Y6F1 533 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 POM121CA8CG34 1229 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
PMS1-209ENST00000424059 HDGFL1Q5TGJ6 251 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 SYT9Q86SS6 491 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 OGFOD1Q8N543 542 aa4.94□□□□□ -1.62
PMS1-209ENST00000424059 C1QTNF9BB2RNN3 333 aa4.93□□□□□ -1.62
PMS1-209ENST00000424059 CLDN10P78369 228 aa4.93□□□□□ -1.62
PMS1-209ENST00000424059 PRRT3Q5FWE3 981 aa4.93□□□□□ -1.62
PMS1-209ENST00000424059 MKRN1Q9UHC7 482 aaKnown RBP4.93□□□□□ -1.62
PMS1-209ENST00000424059 KIAA1024Q9UPX6 916 aa4.93□□□□□ -1.62
PMS1-209ENST00000424059 CD163Q86VB7 1156 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 PHACTR1Q9C0D0 580 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 TSPAN10Q9H1Z9 355 aaPredicted RBP4.92□□□□□ -1.62
PMS1-209ENST00000424059 KCNH4Q9UQ05 1017 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 SPEM2Q0P670 501 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 IER5Q5VY09 327 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 PROSER2Q86WR7 435 aaPredicted RBP4.92□□□□□ -1.62
PMS1-209ENST00000424059 TRIM11Q96F44 468 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 NACC1Q96RE7 527 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 PLVAPQ9BX97 442 aa4.92□□□□□ -1.62
PMS1-209ENST00000424059 PPP1R12BO60237 982 aaPredicted RBP4.91□□□□□ -1.62
PMS1-209ENST00000424059 DKK1O94907 266 aa4.91□□□□□ -1.62
PMS1-209ENST00000424059 TYRO3Q06418 890 aa4.91□□□□□ -1.62
PMS1-209ENST00000424059 BRD7Q9NPI1 651 aa4.91□□□□□ -1.62
PMS1-209ENST00000424059 SEC13P55735 322 aa4.9□□□□□ -1.62
PMS1-209ENST00000424059 SFSWAPQ12872 951 aaKnown RBP4.9□□□□□ -1.62
PMS1-209ENST00000424059 TBCELQ5QJ74 424 aa4.9□□□□□ -1.62
PMS1-209ENST00000424059 SUSD3Q96L08 255 aa4.9□□□□□ -1.62
PMS1-209ENST00000424059 CEP63Q96MT8 703 aa4.9□□□□□ -1.62
PMS1-209ENST00000424059 APBA3O96018 575 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 ADH7P40394 386 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 CHRNA4P43681 627 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 TMEM132AQ24JP5 1023 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 SH3PXD2AQ5TCZ1 1133 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 LARP1Q6PKG0 1096 aaKnown RBP4.9□□□□□ -1.63
PMS1-209ENST00000424059 FNBP4Q8N3X1 1017 aaPredicted RBP4.9□□□□□ -1.63
PMS1-209ENST00000424059 SLC30A3Q99726 388 aa4.9□□□□□ -1.63
PMS1-209ENST00000424059 C2orf49Q9BVC5 232 aaPredicted RBP4.9□□□□□ -1.63
PMS1-209ENST00000424059 MAFBQ9Y5Q3 323 aaPredicted RBP4.9□□□□□ -1.63
PMS1-209ENST00000424059 ATAD2Q6PL18 1390 aa4.89□□□□□ -1.63
PMS1-209ENST00000424059 A6NJR5 290 aa4.89□□□□□ -1.63
PMS1-209ENST00000424059 GATA4P43694 442 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms