RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 DDR1Q08345 913 aa23.87■■□□□ 1.41
HDAC6-205ENST00000423941 TWISTNBQ3B726 338 aaPredicted RBP23.87■■□□□ 1.41
HDAC6-205ENST00000423941 FHDC1Q9C0D6 1143 aaPredicted RBP23.87■■□□□ 1.41
HDAC6-205ENST00000423941 AFDNP55196 1824 aaKnown RBP23.87■■□□□ 1.41
HDAC6-205ENST00000423941 MAP3K15Q6ZN16 1313 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 CACNA1FO60840 1977 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 E9PSI1 815 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 POLRMTO00411 1230 aaKnown RBP23.86■■□□□ 1.41
HDAC6-205ENST00000423941 VAMP4O75379 141 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 EXOSC9Q06265 439 aaKnown RBP23.86■■□□□ 1.41
HDAC6-205ENST00000423941 TBC1D9BQ66K14 1250 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 SYT17Q9BSW7 474 aa23.86■■□□□ 1.41
HDAC6-205ENST00000423941 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
HDAC6-205ENST00000423941 HYPKQ9NX55 129 aa23.85■■□□□ 1.41
HDAC6-205ENST00000423941 HLFQ16534 295 aa23.84■■□□□ 1.41
HDAC6-205ENST00000423941 COPS6Q7L5N1 327 aa23.84■■□□□ 1.41
HDAC6-205ENST00000423941 CD2APQ9Y5K6 639 aa23.84■■□□□ 1.41
HDAC6-205ENST00000423941 PARP3Q9Y6F1 533 aa23.84■■□□□ 1.41
HDAC6-205ENST00000423941 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.41
HDAC6-205ENST00000423941 XAGE3Q8WTP9 111 aa23.82■■□□□ 1.4
HDAC6-205ENST00000423941 ZNF652Q9Y2D9 606 aa23.82■■□□□ 1.4
HDAC6-205ENST00000423941 GIGYF2Q6Y7W6 1299 aaKnown RBP23.81■■□□□ 1.4
HDAC6-205ENST00000423941 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
HDAC6-205ENST00000423941 SERPINB2P05120 415 aa23.8■■□□□ 1.4
HDAC6-205ENST00000423941 KIF6Q6ZMV9 814 aa23.8■■□□□ 1.4
HDAC6-205ENST00000423941 KIAA1551Q9HCM1 1747 aa23.8■■□□□ 1.4
HDAC6-205ENST00000423941 ATP10DQ9P241 1426 aa23.8■■□□□ 1.4
HDAC6-205ENST00000423941 HNRNPUQ00839 825 aaKnown RBP eCLIP23.79■■□□□ 1.4
HDAC6-205ENST00000423941 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
HDAC6-205ENST00000423941 ZNF34Q8IZ26 560 aa23.78■■□□□ 1.4
HDAC6-205ENST00000423941 PLBD2Q8NHP8 589 aa23.78■■□□□ 1.4
HDAC6-205ENST00000423941 SETDB2Q96T68 719 aa23.78■■□□□ 1.4
HDAC6-205ENST00000423941 ZBTB3Q9H5J0 574 aa23.78■■□□□ 1.4
HDAC6-205ENST00000423941 PHAXQ9H814 394 aaKnown RBP23.78■■□□□ 1.4
HDAC6-205ENST00000423941 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
HDAC6-205ENST00000423941 ANKRD36CQ5JPF3 1778 aa23.77■■□□□ 1.4
HDAC6-205ENST00000423941 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
HDAC6-205ENST00000423941 ANKRD13DQ6ZTN6 518 aa23.76■■□□□ 1.39
HDAC6-205ENST00000423941 NLGN2Q8NFZ4 835 aa23.75■■□□□ 1.39
HDAC6-205ENST00000423941 NIP7Q9Y221 180 aaKnown RBP eCLIP23.75■■□□□ 1.39
HDAC6-205ENST00000423941 ARFGEF2Q9Y6D5 1785 aa23.74■■□□□ 1.39
HDAC6-205ENST00000423941 SLC4A2P04920 1241 aa23.74■■□□□ 1.39
HDAC6-205ENST00000423941 TGFB2P61812 414 aa23.74■■□□□ 1.39
HDAC6-205ENST00000423941 TCIRG1Q13488 830 aa23.74■■□□□ 1.39
HDAC6-205ENST00000423941 STK31Q9BXU1 1019 aa23.74■■□□□ 1.39
HDAC6-205ENST00000423941 ANKRD31Q8N7Z5 1873 aa23.73■■□□□ 1.39
HDAC6-205ENST00000423941 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
HDAC6-205ENST00000423941 UBN2Q6ZU65 1347 aa23.73■■□□□ 1.39
HDAC6-205ENST00000423941 PRR5LQ6MZQ0 368 aa23.72■■□□□ 1.39
HDAC6-205ENST00000423941 G2E3Q7L622 706 aa23.72■■□□□ 1.39
HDAC6-205ENST00000423941 ZNF428Q96B54 188 aa23.72■■□□□ 1.39
HDAC6-205ENST00000423941 PXDNLA1KZ92 1463 aa23.71■■□□□ 1.39
HDAC6-205ENST00000423941 IBTKQ9P2D0 1353 aaPredicted RBP23.71■■□□□ 1.39
HDAC6-205ENST00000423941 TCERG1O14776 1098 aaKnown RBP23.71■■□□□ 1.39
HDAC6-205ENST00000423941 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
HDAC6-205ENST00000423941 BRCA1P38398 1863 aaKnown RBP23.7■■□□□ 1.39
HDAC6-205ENST00000423941 N4BP2Q86UW6 1770 aaPredicted RBP23.7■■□□□ 1.39
HDAC6-205ENST00000423941 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
HDAC6-205ENST00000423941 KCNA3P22001 575 aa23.7■■□□□ 1.38
HDAC6-205ENST00000423941 TRIM28Q13263 835 aaKnown RBP23.7■■□□□ 1.38
HDAC6-205ENST00000423941 PARP10Q53GL7 1025 aa23.7■■□□□ 1.38
HDAC6-205ENST00000423941 ISCA1Q9BUE6 129 aa23.7■■□□□ 1.38
HDAC6-205ENST00000423941 SUSD4Q5VX71 490 aa23.69■■□□□ 1.38
HDAC6-205ENST00000423941 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
HDAC6-205ENST00000423941 KLHL34Q8N239 644 aa23.69■■□□□ 1.38
HDAC6-205ENST00000423941 NBPF5PQ86XG9 351 aaPredicted RBP23.68■■□□□ 1.38
HDAC6-205ENST00000423941 CNBD1Q8NA66 436 aa23.68■■□□□ 1.38
HDAC6-205ENST00000423941 BRIP1Q9BX63 1249 aa23.68■■□□□ 1.38
HDAC6-205ENST00000423941 ADCY9O60503 1353 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 NTSR2O95665 410 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 DDX58O95786 925 aaKnown RBP23.67■■□□□ 1.38
HDAC6-205ENST00000423941 GPTP24298 496 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 FLIIQ13045 1269 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 KSR2Q6VAB6 950 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 NLRP10Q86W26 655 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 DLEC1Q9Y238 1755 aa23.67■■□□□ 1.38
HDAC6-205ENST00000423941 KLRG2A4D1S0 409 aaPredicted RBP23.66■■□□□ 1.38
HDAC6-205ENST00000423941 RIC3Q7Z5B4 369 aa23.66■■□□□ 1.38
HDAC6-205ENST00000423941 NYXQ9GZU5 481 aa23.66■■□□□ 1.38
HDAC6-205ENST00000423941 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 PI4KAP2A4QPH2 592 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 DPEP1P16444 411 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 ALDH1L2Q3SY69 923 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 PI4KAP1Q8N8J0 262 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 METTL22Q9BUU2 404 aaPredicted RBP23.65■■□□□ 1.38
HDAC6-205ENST00000423941 RIC1Q4ADV7 1423 aa23.65■■□□□ 1.38
HDAC6-205ENST00000423941 RNF123Q5XPI4 1314 aa23.64■■□□□ 1.38
HDAC6-205ENST00000423941 PPP1R42Q7Z4L9 355 aa23.64■■□□□ 1.37
HDAC6-205ENST00000423941 MRPL50Q8N5N7 158 aaKnown RBP23.64■■□□□ 1.37
HDAC6-205ENST00000423941 PDZRN3Q9UPQ7 1066 aa23.64■■□□□ 1.37
HDAC6-205ENST00000423941 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
HDAC6-205ENST00000423941 ST5P78524 1137 aa23.63■■□□□ 1.37
HDAC6-205ENST00000423941 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
HDAC6-205ENST00000423941 CCDC24Q8N4L8 307 aa23.63■■□□□ 1.37
HDAC6-205ENST00000423941 SSH1Q8WYL5 1049 aa23.63■■□□□ 1.37
HDAC6-205ENST00000423941 MAP3K2Q9Y2U5 619 aa23.63■■□□□ 1.37
HDAC6-205ENST00000423941 PDE6BP35913 854 aa23.62■■□□□ 1.37
HDAC6-205ENST00000423941 COL11A2P13942 1736 aaPredicted RBP23.62■■□□□ 1.37
HDAC6-205ENST00000423941 ATP5J2-PTCD1G3V325 749 aa23.61■■□□□ 1.37
HDAC6-205ENST00000423941 CHRNA5P30532 468 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 900.5 ms