RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 ARXQ96QS3 562 aa20.22■□□□□ 0.83
ABCA1-203ENST00000423487 MAP3K2Q9Y2U5 619 aa20.22■□□□□ 0.83
ABCA1-203ENST00000423487 MYH14Q7Z406 1995 aaKnown RBP20.22■□□□□ 0.83
ABCA1-203ENST00000423487 SLC4A10Q6U841 1118 aa20.22■□□□□ 0.83
ABCA1-203ENST00000423487 DZIP3Q86Y13 1208 aaKnown RBP20.22■□□□□ 0.83
ABCA1-203ENST00000423487 TMEM57Q8N5G2 664 aa20.22■□□□□ 0.83
ABCA1-203ENST00000423487 COL15A1P39059 1388 aa20.21■□□□□ 0.83
ABCA1-203ENST00000423487 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
ABCA1-203ENST00000423487 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
ABCA1-203ENST00000423487 DEFB132Q7Z7B7 95 aa20.21■□□□□ 0.83
ABCA1-203ENST00000423487 MAP3K15Q6ZN16 1313 aa20.2■□□□□ 0.82
ABCA1-203ENST00000423487 PXDNLA1KZ92 1463 aa20.2■□□□□ 0.82
ABCA1-203ENST00000423487 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
ABCA1-203ENST00000423487 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
ABCA1-203ENST00000423487 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 ADRA2BP18089 450 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 NEXNQ0ZGT2 675 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
ABCA1-203ENST00000423487 ZBTB3Q9H5J0 574 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
ABCA1-203ENST00000423487 FKBP8Q14318 412 aa20.18■□□□□ 0.82
ABCA1-203ENST00000423487 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
ABCA1-203ENST00000423487 UPF1Q92900 1129 aaKnown RBP eCLIP20.18■□□□□ 0.82
ABCA1-203ENST00000423487 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
ABCA1-203ENST00000423487 DDX19BQ9UMR2 479 aa20.18■□□□□ 0.82
ABCA1-203ENST00000423487 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
ABCA1-203ENST00000423487 SSFA2P28290 1259 aa20.17■□□□□ 0.82
ABCA1-203ENST00000423487 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
ABCA1-203ENST00000423487 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
ABCA1-203ENST00000423487 BEND3Q5T5X7 828 aa20.17■□□□□ 0.82
ABCA1-203ENST00000423487 LINS1Q8NG48 757 aa20.17■□□□□ 0.82
ABCA1-203ENST00000423487 CHMP4BQ9H444 224 aaKnown RBP20.17■□□□□ 0.82
ABCA1-203ENST00000423487 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
ABCA1-203ENST00000423487 GIGYF2Q6Y7W6 1299 aaKnown RBP20.16■□□□□ 0.82
ABCA1-203ENST00000423487 MYD88Q99836 296 aa20.16■□□□□ 0.82
ABCA1-203ENST00000423487 TFCP2L1Q9NZI6 479 aa20.16■□□□□ 0.82
ABCA1-203ENST00000423487 RGL2O15211 777 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 PHF14O94880 888 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
ABCA1-203ENST00000423487 NARFQ9UHQ1 456 aa20.15■□□□□ 0.82
ABCA1-203ENST00000423487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
ABCA1-203ENST00000423487 ZPR1O75312 459 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 RFC4P35249 363 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 STK32BQ9NY57 414 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 ZNF652Q9Y2D9 606 aa20.14■□□□□ 0.81
ABCA1-203ENST00000423487 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
ABCA1-203ENST00000423487 IGKV5-2P06315 115 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 AAMPQ13685 434 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 HLFQ16534 295 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 SLC15A2Q16348 729 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
ABCA1-203ENST00000423487 ARFGEF2Q9Y6D5 1785 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
ABCA1-203ENST00000423487 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 NUP188Q5SRE5 1749 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 NEURL1BA8MQ27 555 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 ZBTB7BO15156 539 aaPredicted RBP20.11■□□□□ 0.81
ABCA1-203ENST00000423487 TRIM28Q13263 835 aaKnown RBP20.11■□□□□ 0.81
ABCA1-203ENST00000423487 CWF19L2Q2TBE0 894 aaKnown RBP20.11■□□□□ 0.81
ABCA1-203ENST00000423487 ISCA1Q9BUE6 129 aa20.11■□□□□ 0.81
ABCA1-203ENST00000423487 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
ABCA1-203ENST00000423487 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
ABCA1-203ENST00000423487 ANO8Q9HCE9 1232 aaPredicted RBP20.1■□□□□ 0.81
ABCA1-203ENST00000423487 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
ABCA1-203ENST00000423487 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
ABCA1-203ENST00000423487 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.81
ABCA1-203ENST00000423487 GNAI3P08754 354 aa20.08■□□□□ 0.81
ABCA1-203ENST00000423487 GCKRQ14397 625 aa20.08■□□□□ 0.81
ABCA1-203ENST00000423487 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
ABCA1-203ENST00000423487 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.81
ABCA1-203ENST00000423487 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
ABCA1-203ENST00000423487 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.81
ABCA1-203ENST00000423487 MEIS3Q99687 375 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 USP44Q9H0E7 712 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 BCL2L12Q9HB09 334 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 ZBTB40Q9NUA8 1239 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 GPTP24298 496 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 PARP10Q53GL7 1025 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
ABCA1-203ENST00000423487 HDAC5Q9UQL6 1122 aa20.07■□□□□ 0.8
ABCA1-203ENST00000423487 PNPLA7Q6ZV29 1317 aa20.06■□□□□ 0.8
ABCA1-203ENST00000423487 SCN7AQ01118 1682 aa20.06■□□□□ 0.8
ABCA1-203ENST00000423487 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
ABCA1-203ENST00000423487 GRM8O00222 908 aa20.06■□□□□ 0.8
ABCA1-203ENST00000423487 NLRP10Q86W26 655 aa20.06■□□□□ 0.8
ABCA1-203ENST00000423487 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
ABCA1-203ENST00000423487 MSH5O43196 834 aa20.05■□□□□ 0.8
ABCA1-203ENST00000423487 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
ABCA1-203ENST00000423487 C4AP0C0L4 1744 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms