RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 ERC1Q8IUD2 1116 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 PLBD2Q8NHP8 589 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 EXOC5O00471 708 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 TOM1O60784 492 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
SNX20-203ENST00000423026 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
SNX20-203ENST00000423026 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 REC8O95072 547 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
SNX20-203ENST00000423026 HSCBQ8IWL3 235 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 SUCLG2Q96I99 432 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 TEX13AQ9BXU3 409 aaPredicted RBP11.06□□□□□ -0.64
SNX20-203ENST00000423026 PAPPAQ13219 1627 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 TRIM6-TRIM34B2RNG4 842 aa11.06□□□□□ -0.64
SNX20-203ENST00000423026 CLASRPQ8N2M8 674 aaKnown RBP11.06□□□□□ -0.64
SNX20-203ENST00000423026 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
SNX20-203ENST00000423026 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNX20-203ENST00000423026 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
SNX20-203ENST00000423026 CDCA7Q9BWT1 371 aaPredicted RBP11.05□□□□□ -0.64
SNX20-203ENST00000423026 BICC1Q9H694 974 aaKnown RBP11.05□□□□□ -0.64
SNX20-203ENST00000423026 AFDNP55196 1824 aaKnown RBP11.05□□□□□ -0.64
SNX20-203ENST00000423026 COL16A1Q07092 1604 aaPredicted RBP11.05□□□□□ -0.64
SNX20-203ENST00000423026 TNS2Q63HR2 1409 aa11.05□□□□□ -0.64
SNX20-203ENST00000423026 ARFGEF2Q9Y6D5 1785 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 ERC2O15083 957 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 DISP2A7MBM2 1401 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 ADAMTS2O95450 1211 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 A1BGP04217 495 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 NBPF14Q5TI25 921 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 TSHZ3Q63HK5 1081 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
SNX20-203ENST00000423026 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 NBPF15Q8N660 670 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 SNX21Q969T3 373 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 GLI3P10071 1580 aa11.04□□□□□ -0.64
SNX20-203ENST00000423026 PIGBQ92521 554 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 GPATCH3Q96I76 525 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
SNX20-203ENST00000423026 TOGARAM1Q9Y4F4 1720 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 A0A087WZG4 1122 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 STARD3NLO95772 234 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 PLCH1Q4KWH8 1693 aa11.03□□□□□ -0.64
SNX20-203ENST00000423026 ITGB4P16144 1822 aa11.02□□□□□ -0.64
SNX20-203ENST00000423026 TTC41PQ6P2S7 1318 aa11.02□□□□□ -0.64
SNX20-203ENST00000423026 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
SNX20-203ENST00000423026 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
SNX20-203ENST00000423026 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
SNX20-203ENST00000423026 PA2G4Q9UQ80 394 aaKnown RBP11.02□□□□□ -0.65
SNX20-203ENST00000423026 COL15A1P39059 1388 aa11.02□□□□□ -0.65
SNX20-203ENST00000423026 AK9Q5TCS8 1911 aa11.02□□□□□ -0.65
SNX20-203ENST00000423026 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 GLRX3O76003 335 aaKnown RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 TTLL7Q6ZT98 887 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 ZMYND15Q9H091 742 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 SLKQ9H2G2 1235 aaPredicted RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 CWC25Q9NXE8 425 aaPredicted RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 RABEP1Q15276 862 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 LRP6O75581 1613 aa11.01□□□□□ -0.65
SNX20-203ENST00000423026 USP42Q9H9J4 1324 aaKnown RBP11.01□□□□□ -0.65
SNX20-203ENST00000423026 WNK3Q9BYP7 1800 aa11□□□□□ -0.65
SNX20-203ENST00000423026 CHMLP26374 656 aa11□□□□□ -0.65
SNX20-203ENST00000423026 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
SNX20-203ENST00000423026 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
SNX20-203ENST00000423026 KIF2CQ99661 725 aa11□□□□□ -0.65
SNX20-203ENST00000423026 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
SNX20-203ENST00000423026 ECHDC1Q9NTX5 307 aa11□□□□□ -0.65
SNX20-203ENST00000423026 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
SNX20-203ENST00000423026 MCCP23508 829 aa11□□□□□ -0.65
SNX20-203ENST00000423026 DDB1Q16531 1140 aa11□□□□□ -0.65
SNX20-203ENST00000423026 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
SNX20-203ENST00000423026 AACSQ86V21 672 aa11□□□□□ -0.65
SNX20-203ENST00000423026 DNAJC10Q8IXB1 793 aa11□□□□□ -0.65
SNX20-203ENST00000423026 PI4K2BQ8TCG2 481 aa11□□□□□ -0.65
SNX20-203ENST00000423026 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
SNX20-203ENST00000423026 BCL9O00512 1426 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 H7C1W4 665 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
SNX20-203ENST00000423026 EPHA10Q5JZY3 1008 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
SNX20-203ENST00000423026 SIL1Q9H173 461 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 COPRSQ9NQ92 184 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
SNX20-203ENST00000423026 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
SNX20-203ENST00000423026 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
SNX20-203ENST00000423026 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms