RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
TRPS1-204ENST00000422939 LGR5O75473 907 aa11.27□□□□□ -0.61
TRPS1-204ENST00000422939 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
TRPS1-204ENST00000422939 ELOAQ14241 798 aaKnown RBP11.27□□□□□ -0.61
TRPS1-204ENST00000422939 KLRG1Q96E93 195 aa11.27□□□□□ -0.61
TRPS1-204ENST00000422939 ADAMTS8Q9UP79 889 aa11.27□□□□□ -0.61
TRPS1-204ENST00000422939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
TRPS1-204ENST00000422939 C2CD2LO14523 706 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 FAM157BP0CG42 384 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 BCRP11274 1271 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 MAP3K10Q02779 954 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 LRRC69Q6ZNQ3 347 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 ALDH16A1Q8IZ83 802 aa11.26□□□□□ -0.61
TRPS1-204ENST00000422939 DCDC2BA2VCK2 349 aa11.25□□□□□ -0.61
TRPS1-204ENST00000422939 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
TRPS1-204ENST00000422939 BMP4P12644 408 aa11.25□□□□□ -0.61
TRPS1-204ENST00000422939 OXCT2Q9BYC2 517 aaPredicted RBP11.25□□□□□ -0.61
TRPS1-204ENST00000422939 LRRC4BQ9NT99 713 aa11.25□□□□□ -0.61
TRPS1-204ENST00000422939 HCN2Q9UL51 889 aa11.25□□□□□ -0.61
TRPS1-204ENST00000422939 ATG7O95352 703 aa11.24□□□□□ -0.61
TRPS1-204ENST00000422939 WEE1P30291 646 aa11.24□□□□□ -0.61
TRPS1-204ENST00000422939 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
TRPS1-204ENST00000422939 ENAMQ9NRM1 1142 aa11.24□□□□□ -0.61
TRPS1-204ENST00000422939 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
TRPS1-204ENST00000422939 EFSO43281 561 aa11.23□□□□□ -0.61
TRPS1-204ENST00000422939 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
TRPS1-204ENST00000422939 ZMIZ1Q9ULJ6 1067 aa11.23□□□□□ -0.61
TRPS1-204ENST00000422939 PBXIP1Q96AQ6 731 aa11.22□□□□□ -0.61
TRPS1-204ENST00000422939 GDF2Q9UK05 429 aaPredicted RBP11.22□□□□□ -0.61
TRPS1-204ENST00000422939 ACIN1Q9UKV3 1341 aaKnown RBP11.21□□□□□ -0.61
TRPS1-204ENST00000422939 OIP5O43482 229 aa11.21□□□□□ -0.61
TRPS1-204ENST00000422939 CD33P20138 364 aa11.21□□□□□ -0.61
TRPS1-204ENST00000422939 SWI5Q1ZZU3 235 aa11.21□□□□□ -0.61
TRPS1-204ENST00000422939 MARK1Q9P0L2 795 aa11.21□□□□□ -0.61
TRPS1-204ENST00000422939 FOXO3O43524 673 aa11.2□□□□□ -0.62
TRPS1-204ENST00000422939 GOLGA6L1Q8N7Z2 621 aa11.2□□□□□ -0.62
TRPS1-204ENST00000422939 NGLY1Q96IV0 654 aa11.2□□□□□ -0.62
TRPS1-204ENST00000422939 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
TRPS1-204ENST00000422939 ARAFP10398 606 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 CCDC82Q8N4S0 544 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 ZNF280CQ8ND82 737 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
TRPS1-204ENST00000422939 HIF1AQ16665 826 aa11.18□□□□□ -0.62
TRPS1-204ENST00000422939 RTN1Q16799 776 aa11.18□□□□□ -0.62
TRPS1-204ENST00000422939 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
TRPS1-204ENST00000422939 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
TRPS1-204ENST00000422939 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
TRPS1-204ENST00000422939 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-204ENST00000422939 GALNT6Q8NCL4 622 aa11.17□□□□□ -0.62
TRPS1-204ENST00000422939 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-204ENST00000422939 GGA1Q9UJY5 639 aa11.17□□□□□ -0.62
TRPS1-204ENST00000422939 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
TRPS1-204ENST00000422939 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
TRPS1-204ENST00000422939 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
TRPS1-204ENST00000422939 CEP63Q96MT8 703 aa11.16□□□□□ -0.62
TRPS1-204ENST00000422939 SFSWAPQ12872 951 aaKnown RBP11.15□□□□□ -0.62
TRPS1-204ENST00000422939 SLCO4C1Q6ZQN7 724 aa11.15□□□□□ -0.62
TRPS1-204ENST00000422939 PRIMPOLQ96LW4 560 aa11.15□□□□□ -0.62
TRPS1-204ENST00000422939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.624e-9■■■■■ 223.6
TRPS1-204ENST00000422939 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
TRPS1-204ENST00000422939 DNMT3AQ9Y6K1 912 aaPredicted RBP11.15□□□□□ -0.62
TRPS1-204ENST00000422939 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
TRPS1-204ENST00000422939 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
TRPS1-204ENST00000422939 SCARF2Q96GP6 870 aaPredicted RBP11.14□□□□□ -0.63
TRPS1-204ENST00000422939 BRD7Q9NPI1 651 aa11.14□□□□□ -0.63
TRPS1-204ENST00000422939 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 PRMT3O60678 531 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 ADH6P28332 368 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 KCNQ4P56696 695 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 TYRO3Q06418 890 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 OCLNQ16625 522 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 ZNF468Q5VIY5 522 aaPredicted RBP11.13□□□□□ -0.63
TRPS1-204ENST00000422939 IER5Q5VY09 327 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
TRPS1-204ENST00000422939 SHISA8B8ZZ34 492 aa11.12□□□□□ -0.63
TRPS1-204ENST00000422939 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
TRPS1-204ENST00000422939 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
TRPS1-204ENST00000422939 MYO19Q96H55 970 aa11.12□□□□□ -0.63
TRPS1-204ENST00000422939 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
TRPS1-204ENST00000422939 TGFBR3LH3BV60 316 aa11.11□□□□□ -0.63
TRPS1-204ENST00000422939 EPXP11678 715 aa11.11□□□□□ -0.63
TRPS1-204ENST00000422939 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
TRPS1-204ENST00000422939 BCS1LQ9Y276 419 aa11.11□□□□□ -0.63
TRPS1-204ENST00000422939 PPP1R15AO75807 674 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-204ENST00000422939 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
TRPS1-204ENST00000422939 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
TRPS1-204ENST00000422939 GSK3AP49840 483 aa11.09□□□□□ -0.63
TRPS1-204ENST00000422939 PCBP4P57723 403 aaKnown RBP11.09□□□□□ -0.63
TRPS1-204ENST00000422939 DGKZQ13574 1117 aa11.09□□□□□ -0.63
TRPS1-204ENST00000422939 C11orf91Q3C1V1 193 aa11.09□□□□□ -0.63
TRPS1-204ENST00000422939 BEND7Q8N7W2 519 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-204ENST00000422939 CLP1Q92989 425 aaKnown RBP11.09□□□□□ -0.63
TRPS1-204ENST00000422939 SLC30A3Q99726 388 aa11.09□□□□□ -0.63
TRPS1-204ENST00000422939 KLK14Q9P0G3 267 aa11.09□□□□□ -0.63
TRPS1-204ENST00000422939 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
TRPS1-204ENST00000422939 SYT9Q86SS6 491 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms