RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
CDCA3-202ENST00000422785 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
CDCA3-202ENST00000422785 TNPO1Q92973 898 aaKnown RBP16.83■□□□□ 0.28
CDCA3-202ENST00000422785 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
CDCA3-202ENST00000422785 DDX11L8A8MPP1 907 aa16.82■□□□□ 0.28
CDCA3-202ENST00000422785 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
CDCA3-202ENST00000422785 MCCP23508 829 aa16.82■□□□□ 0.28
CDCA3-202ENST00000422785 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
CDCA3-202ENST00000422785 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
CDCA3-202ENST00000422785 ANAPC15P60006 121 aa16.82■□□□□ 0.28
CDCA3-202ENST00000422785 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
CDCA3-202ENST00000422785 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
CDCA3-202ENST00000422785 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
CDCA3-202ENST00000422785 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
CDCA3-202ENST00000422785 GCKRQ14397 625 aa16.81■□□□□ 0.28
CDCA3-202ENST00000422785 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
CDCA3-202ENST00000422785 ABCA3Q99758 1704 aa16.81■□□□□ 0.28
CDCA3-202ENST00000422785 GLI3P10071 1580 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
CDCA3-202ENST00000422785 LAMB4A4D0S4 1761 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 GLRX3O76003 335 aaKnown RBP16.8■□□□□ 0.28
CDCA3-202ENST00000422785 GBP4Q96PP9 640 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 MYD88Q99836 296 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
CDCA3-202ENST00000422785 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
CDCA3-202ENST00000422785 NKX1-1Q15270 411 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-202ENST00000422785 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-202ENST00000422785 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
CDCA3-202ENST00000422785 IL2RBP14784 551 aa16.78■□□□□ 0.28
CDCA3-202ENST00000422785 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDCA3-202ENST00000422785 ECHDC1Q9NTX5 307 aa16.78■□□□□ 0.28
CDCA3-202ENST00000422785 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
CDCA3-202ENST00000422785 TRAK2O60296 914 aa16.77■□□□□ 0.28
CDCA3-202ENST00000422785 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
CDCA3-202ENST00000422785 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.28
CDCA3-202ENST00000422785 PALD1Q9ULE6 856 aa16.77■□□□□ 0.28
CDCA3-202ENST00000422785 SGSM2O43147 1006 aa16.77■□□□□ 0.27
CDCA3-202ENST00000422785 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.27
CDCA3-202ENST00000422785 MCM2P49736 904 aa16.77■□□□□ 0.27
CDCA3-202ENST00000422785 NEK4P51957 841 aa16.77■□□□□ 0.27
CDCA3-202ENST00000422785 IL25Q9H293 177 aa16.77■□□□□ 0.27
CDCA3-202ENST00000422785 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 SASH1O94885 1247 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 UBE2Q2Q8WVN8 375 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 COL15A1P39059 1388 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 ARFGEF2Q9Y6D5 1785 aa16.76■□□□□ 0.27
CDCA3-202ENST00000422785 PTMSP20962 102 aa16.75■□□□□ 0.27
CDCA3-202ENST00000422785 HSPA4P34932 840 aa16.75■□□□□ 0.27
CDCA3-202ENST00000422785 AACSQ86V21 672 aa16.75■□□□□ 0.27
CDCA3-202ENST00000422785 NUCB2P80303 420 aa16.75■□□□□ 0.27
CDCA3-202ENST00000422785 SSFA2P28290 1259 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 EPHA10Q5JZY3 1008 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
CDCA3-202ENST00000422785 SHANK3Q9BYB0 1731 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 RAD50Q92878 1312 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 EVA1CP58658 441 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
CDCA3-202ENST00000422785 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
CDCA3-202ENST00000422785 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
CDCA3-202ENST00000422785 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
CDCA3-202ENST00000422785 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
CDCA3-202ENST00000422785 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
CDCA3-202ENST00000422785 NBPF10Q6P3W6 841 aaKnown RBP16.73■□□□□ 0.27
CDCA3-202ENST00000422785 NBPF15Q8N660 670 aa16.73■□□□□ 0.27
CDCA3-202ENST00000422785 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 EVI5LQ96CN4 794 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 UBE3BQ7Z3V4 1068 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 SIL1Q9H173 461 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 DIAPH3Q9NSV4 1193 aa16.72■□□□□ 0.27
CDCA3-202ENST00000422785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
CDCA3-202ENST00000422785 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
CDCA3-202ENST00000422785 KIAA1211Q6ZU35 1233 aa16.71■□□□□ 0.27
CDCA3-202ENST00000422785 ZGPATQ8N5A5 531 aaKnown RBP16.71■□□□□ 0.27
CDCA3-202ENST00000422785 TNS2Q63HR2 1409 aa16.71■□□□□ 0.27
CDCA3-202ENST00000422785 A0A087WZG4 1122 aa16.71■□□□□ 0.26
CDCA3-202ENST00000422785 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.26
CDCA3-202ENST00000422785 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.26
CDCA3-202ENST00000422785 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.26
CDCA3-202ENST00000422785 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
CDCA3-202ENST00000422785 CASP7P55210 303 aa16.7■□□□□ 0.26
CDCA3-202ENST00000422785 CUL4AQ13619 759 aa16.7■□□□□ 0.26
CDCA3-202ENST00000422785 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
CDCA3-202ENST00000422785 BAG4O95429 457 aaKnown RBP16.69■□□□□ 0.26
CDCA3-202ENST00000422785 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
CDCA3-202ENST00000422785 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
CDCA3-202ENST00000422785 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
CDCA3-202ENST00000422785 L1TD1Q5T7N2 865 aaKnown RBP16.69■□□□□ 0.26
CDCA3-202ENST00000422785 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms