RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 METTL22Q9BUU2 404 aaPredicted RBP28.3■■■□□ 2.12
LSM8-203ENST00000422760 LRP6O75581 1613 aa28.3■■■□□ 2.12
LSM8-203ENST00000422760 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
LSM8-203ENST00000422760 TOM1O60784 492 aa28.29■■■□□ 2.12
LSM8-203ENST00000422760 SURF6O75683 361 aaKnown RBP28.29■■■□□ 2.12
LSM8-203ENST00000422760 ISY1Q9ULR0 285 aaKnown RBP28.29■■■□□ 2.12
LSM8-203ENST00000422760 HDAC5Q9UQL6 1122 aa28.29■■■□□ 2.12
LSM8-203ENST00000422760 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 MYD88Q99836 296 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 NUP188Q5SRE5 1749 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 NBPF26B4DH59 902 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 RAB11FIP3O75154 756 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 NBPF10Q6P3W6 841 aaKnown RBP28.28■■■□□ 2.12
LSM8-203ENST00000422760 CASC1Q6TDU7 716 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 NBPF15Q8N660 670 aa28.28■■■□□ 2.12
LSM8-203ENST00000422760 SDSP20132 328 aa28.27■■■□□ 2.12
LSM8-203ENST00000422760 KIF2CQ99661 725 aa28.26■■■□□ 2.11
LSM8-203ENST00000422760 MX1P20591 662 aa28.26■■■□□ 2.11
LSM8-203ENST00000422760 SUCLG2Q96I99 432 aa28.26■■■□□ 2.11
LSM8-203ENST00000422760 GCKRQ14397 625 aa28.25■■■□□ 2.11
LSM8-203ENST00000422760 NWD2Q9ULI1 1742 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 K7ELQ4 463 aaPredicted RBP28.24■■■□□ 2.11
LSM8-203ENST00000422760 PIGBQ92521 554 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 KAZALD1Q96I82 304 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 GBP4Q96PP9 640 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 IL1RAPL2Q9NP60 686 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 RABEP1Q15276 862 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 TSHZ3Q63HK5 1081 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 IL27Q8NEV9 243 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 RHPN1Q8TCX5 695 aa28.24■■■□□ 2.11
LSM8-203ENST00000422760 PLBD2Q8NHP8 589 aa28.23■■■□□ 2.11
LSM8-203ENST00000422760 BICC1Q9H694 974 aaKnown RBP28.23■■■□□ 2.11
LSM8-203ENST00000422760 KIF1BPQ96EK5 621 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 EXOC5O00471 708 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 A1BGP04217 495 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 HSP90AB4PQ58FF6 505 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 ASAP1Q9ULH1 1129 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
LSM8-203ENST00000422760 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
LSM8-203ENST00000422760 KAT6BQ8WYB5 2073 aa28.21■■■□□ 2.11
LSM8-203ENST00000422760 NUTM2BA6NNL0 878 aaPredicted RBP28.21■■■□□ 2.11
LSM8-203ENST00000422760 NUTM2EB1AL46 878 aaPredicted RBP28.21■■■□□ 2.11
LSM8-203ENST00000422760 NUTM2AQ8IVF1 878 aaPredicted RBP28.21■■■□□ 2.11
LSM8-203ENST00000422760 BCL9O00512 1426 aa28.2■■■□□ 2.11
LSM8-203ENST00000422760 STAP2Q9UGK3 403 aa28.2■■■□□ 2.11
LSM8-203ENST00000422760 SKOR2Q2VWA4 1001 aaPredicted RBP28.2■■■□□ 2.1
LSM8-203ENST00000422760 BRPF3Q9ULD4 1205 aa28.2■■■□□ 2.1
LSM8-203ENST00000422760 ATG3Q9NT62 314 aa28.19■■■□□ 2.1
LSM8-203ENST00000422760 RAB3GAP1Q15042 981 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 CDCA7Q9BWT1 371 aaPredicted RBP28.18■■■□□ 2.1
LSM8-203ENST00000422760 AOX1Q06278 1338 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 TRAK2O60296 914 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 TTLL7Q6ZT98 887 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 SPRYD3Q8NCJ5 442 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 SLIT2O94813 1529 aa28.18■■■□□ 2.1
LSM8-203ENST00000422760 OS9Q13438 667 aaPredicted RBP28.17■■■□□ 2.1
LSM8-203ENST00000422760 FSD2A1L4K1 749 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 ATP5J2-PTCD1G3V325 749 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 REC8O95072 547 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 HSP90AA1P07900 732 aaKnown RBP28.16■■■□□ 2.1
LSM8-203ENST00000422760 VSIG10Q8N0Z9 540 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 PA2G4Q9UQ80 394 aaKnown RBP28.16■■■□□ 2.1
LSM8-203ENST00000422760 THRAP3Q9Y2W1 955 aaKnown RBP28.16■■■□□ 2.1
LSM8-203ENST00000422760 TJP1Q07157 1748 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.16■■■□□ 2.1
LSM8-203ENST00000422760 NUTM1Q86Y26 1132 aa28.16■■■□□ 2.1
LSM8-203ENST00000422760 GOLGA6L3A6NEY3 463 aa28.15■■■□□ 2.1
LSM8-203ENST00000422760 UBAP1LF5GYI3 381 aa28.15■■■□□ 2.1
LSM8-203ENST00000422760 CLEC17AQ6ZS10 378 aa28.15■■■□□ 2.1
LSM8-203ENST00000422760 DNAJC10Q8IXB1 793 aa28.14■■■□□ 2.09
LSM8-203ENST00000422760 COL15A1P39059 1388 aa28.14■■■□□ 2.09
LSM8-203ENST00000422760 SPATA31A5Q5VU36 1347 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 SPATA31A7Q8IWB4 1347 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 EPHA10Q5JZY3 1008 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 UBE3BQ7Z3V4 1068 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 USP26Q9BXU7 913 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 AK9Q5TCS8 1911 aa28.13■■■□□ 2.09
LSM8-203ENST00000422760 ERC1Q8IUD2 1116 aa28.12■■■□□ 2.09
LSM8-203ENST00000422760 RBM42Q9BTD8 480 aaKnown RBP28.12■■■□□ 2.09
LSM8-203ENST00000422760 TEX13AQ9BXU3 409 aaPredicted RBP28.12■■■□□ 2.09
LSM8-203ENST00000422760 FAM43AQ8N2R8 423 aa28.12■■■□□ 2.09
LSM8-203ENST00000422760 ZBTB3Q9H5J0 574 aa28.12■■■□□ 2.09
LSM8-203ENST00000422760 A0A087WZG4 1122 aa28.11■■■□□ 2.09
LSM8-203ENST00000422760 DDB1Q16531 1140 aa28.11■■■□□ 2.09
LSM8-203ENST00000422760 JARID2Q92833 1246 aaPredicted RBP28.11■■■□□ 2.09
LSM8-203ENST00000422760 SYTL4Q96C24 671 aaPredicted RBP28.11■■■□□ 2.09
LSM8-203ENST00000422760 TNPO1Q92973 898 aaKnown RBP28.1■■■□□ 2.09
LSM8-203ENST00000422760 CASP7P55210 303 aa28.09■■■□□ 2.09
LSM8-203ENST00000422760 PI4K2BQ8TCG2 481 aa28.09■■■□□ 2.09
LSM8-203ENST00000422760 TRIM6-TRIM34B2RNG4 842 aa28.08■■■□□ 2.09
LSM8-203ENST00000422760 CLASRPQ8N2M8 674 aaKnown RBP28.08■■■□□ 2.09
LSM8-203ENST00000422760 GOLGA6L22H0YM25 854 aa28.08■■■□□ 2.09
LSM8-203ENST00000422760 STARD3NLO95772 234 aa28.08■■■□□ 2.09
LSM8-203ENST00000422760 PRIM1P49642 420 aaKnown RBP28.07■■■□□ 2.08
LSM8-203ENST00000422760 MRE11P49959 708 aa28.07■■■□□ 2.08
LSM8-203ENST00000422760 RABL6Q3YEC7 729 aaPredicted RBP28.07■■■□□ 2.08
LSM8-203ENST00000422760 CWC22Q9HCG8 908 aaKnown RBP28.07■■■□□ 2.08
LSM8-203ENST00000422760 CWC25Q9NXE8 425 aaPredicted RBP28.07■■■□□ 2.08
LSM8-203ENST00000422760 CCDC9Q9Y3X0 531 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms