RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CLASRPQ8N2M8 674 aaKnown RBP19.03■□□□□ 0.64
CDH1-202ENST00000422392 UBE2Q2Q8WVN8 375 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
CDH1-202ENST00000422392 LIMCH1Q9UPQ0 1083 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 EPB41L2O43491 1005 aaKnown RBP19.02■□□□□ 0.64
CDH1-202ENST00000422392 LMOD2Q6P5Q4 547 aa19.02■□□□□ 0.64
CDH1-202ENST00000422392 CRYBG1Q9Y4K1 1723 aa19.02■□□□□ 0.64
CDH1-202ENST00000422392 LMO7Q8WWI1 1683 aa19.02■□□□□ 0.64
CDH1-202ENST00000422392 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
CDH1-202ENST00000422392 RNMTO43148 476 aaKnown RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 STX6O43752 255 aa19.01■□□□□ 0.63
CDH1-202ENST00000422392 AIMP1Q12904 312 aaKnown RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 CCDC83Q8IWF9 413 aa19.01■□□□□ 0.63
CDH1-202ENST00000422392 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 ZSCAN22P10073 491 aaPredicted RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 COL9A3Q14050 684 aaPredicted RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 PLEKHO1Q53GL0 409 aaPredicted RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 SYAP1Q96A49 352 aaPredicted RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 ZKSCAN5Q9Y2L8 839 aa19.01■□□□□ 0.63
CDH1-202ENST00000422392 R3HCC1Q9Y3T6 440 aaKnown RBP19.01■□□□□ 0.63
CDH1-202ENST00000422392 TTC41PQ6P2S7 1318 aa19.01■□□□□ 0.63
CDH1-202ENST00000422392 FIBPO43427 364 aa19■□□□□ 0.63
CDH1-202ENST00000422392 GIGYF1O75420 1035 aaPredicted RBP19■□□□□ 0.63
CDH1-202ENST00000422392 ECHDC1Q9NTX5 307 aa19■□□□□ 0.63
CDH1-202ENST00000422392 HYPKQ9NX55 129 aa19■□□□□ 0.63
CDH1-202ENST00000422392 SMC3Q9UQE7 1217 aa19■□□□□ 0.63
CDH1-202ENST00000422392 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
CDH1-202ENST00000422392 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
CDH1-202ENST00000422392 AACSQ86V21 672 aa19■□□□□ 0.63
CDH1-202ENST00000422392 USP42Q9H9J4 1324 aaKnown RBP18.99■□□□□ 0.63
CDH1-202ENST00000422392 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.99■□□□□ 0.63
CDH1-202ENST00000422392 CCDC8Q9H0W5 538 aaPredicted RBP18.99■□□□□ 0.63
CDH1-202ENST00000422392 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
CDH1-202ENST00000422392 ZNF500O60304 480 aaPredicted RBP18.98■□□□□ 0.63
CDH1-202ENST00000422392 MTX1Q13505 466 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 KSR2Q6VAB6 950 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 SIL1Q9H173 461 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 GJB2P29033 226 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 KLHDC4Q8TBB5 520 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 SUCLG2Q96I99 432 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
CDH1-202ENST00000422392 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.98■□□□□ 0.63
CDH1-202ENST00000422392 F13A1P00488 732 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 TPM2P07951 284 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 KAZALD1Q96I82 304 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 TLR7Q9NYK1 1049 aaKnown RBP18.97■□□□□ 0.63
CDH1-202ENST00000422392 SASH1O94885 1247 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 GCP02774 474 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 PTMAP06454 111 aaKnown RBP18.97■□□□□ 0.63
CDH1-202ENST00000422392 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
CDH1-202ENST00000422392 PDRG1Q9NUG6 133 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 CCDC39Q9UFE4 941 aa18.97■□□□□ 0.63
CDH1-202ENST00000422392 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
CDH1-202ENST00000422392 RUFY2Q8WXA3 655 aa18.96■□□□□ 0.63
CDH1-202ENST00000422392 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
CDH1-202ENST00000422392 AXIN2Q9Y2T1 843 aa18.96■□□□□ 0.63
CDH1-202ENST00000422392 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
CDH1-202ENST00000422392 TCEANC2Q96MN5 208 aa18.96■□□□□ 0.63
CDH1-202ENST00000422392 PHF14O94880 888 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 HCLS1P14317 486 aaPredicted RBP18.95■□□□□ 0.62
CDH1-202ENST00000422392 DNM1Q05193 864 aaKnown RBP18.95■□□□□ 0.62
CDH1-202ENST00000422392 TMEM87AQ8NBN3 555 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 USP25Q9UHP3 1055 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 RRP9O43818 475 aaKnown RBP18.95■□□□□ 0.62
CDH1-202ENST00000422392 ALDH1L1O75891 902 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 ME3Q16798 604 aa18.95■□□□□ 0.62
CDH1-202ENST00000422392 GRM8O00222 908 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 NECTIN1Q15223 517 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 AMOTQ4VCS5 1084 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 CCDC183Q5T5S1 534 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 ARHGEF25Q86VW2 580 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 GPATCH3Q96I76 525 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 RBM8AQ9Y5S9 174 aaKnown RBP18.94■□□□□ 0.62
CDH1-202ENST00000422392 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 VPS37CA5D8V6 355 aaPredicted RBP18.94■□□□□ 0.62
CDH1-202ENST00000422392 KCNJ4P48050 445 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 NMIQ13287 307 aaPredicted RBP18.94■□□□□ 0.62
CDH1-202ENST00000422392 CCDC171Q6TFL3 1326 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 EVI5LQ96CN4 794 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 ZNF830Q96NB3 372 aaPredicted RBP18.94■□□□□ 0.62
CDH1-202ENST00000422392 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 BOLA2Q9H3K6 86 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 ZSWIM6Q9HCJ5 1215 aa18.94■□□□□ 0.62
CDH1-202ENST00000422392 VPS53Q5VIR6 699 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 CHMP4AQ9BY43 222 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 TAF6LQ9Y6J9 622 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 MYL6BP14649 208 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 UBE2HP62256 183 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 RBM10P98175 930 aaKnown RBP18.93■□□□□ 0.62
CDH1-202ENST00000422392 MTMR6Q9Y217 621 aa18.93■□□□□ 0.62
CDH1-202ENST00000422392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDH1-202ENST00000422392 CREB3L3Q68CJ9 461 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
CDH1-202ENST00000422392 A0A0D9SFI3 127 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
CDH1-202ENST00000422392 GIMAP6Q6P9H5 292 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 579 ms