RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 MEIS3Q99687 375 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 CCDC87Q9NVE4 849 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
HPS4-204ENST00000422379 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
HPS4-204ENST00000422379 CWF19L2Q2TBE0 894 aaKnown RBP11.35□□□□□ -0.59
HPS4-204ENST00000422379 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
HPS4-204ENST00000422379 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
HPS4-204ENST00000422379 NUP188Q5SRE5 1749 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
HPS4-204ENST00000422379 MS4A1P11836 297 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
HPS4-204ENST00000422379 RBM19Q9Y4C8 960 aaKnown RBP11.34□□□□□ -0.59
HPS4-204ENST00000422379 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 ATP10DQ9P241 1426 aa11.34□□□□□ -0.59
HPS4-204ENST00000422379 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 TAF1LQ8IZX4 1826 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 APBA3O96018 575 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
HPS4-204ENST00000422379 HLFQ16534 295 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 TBC1D2BQ9UPU7 963 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 CNTNAP4Q9C0A0 1308 aa11.33□□□□□ -0.6
HPS4-204ENST00000422379 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
HPS4-204ENST00000422379 IGHDP01880 384 aa11.32□□□□□ -0.6
HPS4-204ENST00000422379 CCT4P50991 539 aaKnown RBP11.32□□□□□ -0.6
HPS4-204ENST00000422379 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
HPS4-204ENST00000422379 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
HPS4-204ENST00000422379 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
HPS4-204ENST00000422379 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
HPS4-204ENST00000422379 NBPF7P0C2Y1 421 aaPredicted RBP11.31□□□□□ -0.6
HPS4-204ENST00000422379 MYD88Q99836 296 aa11.31□□□□□ -0.6
HPS4-204ENST00000422379 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
HPS4-204ENST00000422379 PLSCR1O15162 318 aa11.31□□□□□ -0.6
HPS4-204ENST00000422379 DDX58O95786 925 aaKnown RBP11.31□□□□□ -0.6
HPS4-204ENST00000422379 JARID2Q92833 1246 aaPredicted RBP11.31□□□□□ -0.6
HPS4-204ENST00000422379 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
HPS4-204ENST00000422379 COL15A1P39059 1388 aa11.3□□□□□ -0.6
HPS4-204ENST00000422379 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
HPS4-204ENST00000422379 DZIP3Q86Y13 1208 aaKnown RBP11.3□□□□□ -0.6
HPS4-204ENST00000422379 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
HPS4-204ENST00000422379 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 GNPATO15228 680 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
HPS4-204ENST00000422379 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 SRCAPQ6ZRS2 3230 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 ZNF827Q17R98 1081 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 ARXQ96QS3 562 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 ISCA1Q9BUE6 129 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 BCL2L12Q9HB09 334 aa11.29□□□□□ -0.6
HPS4-204ENST00000422379 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
HPS4-204ENST00000422379 GCKRQ14397 625 aa11.28□□□□□ -0.6
HPS4-204ENST00000422379 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
HPS4-204ENST00000422379 CAMKK2Q96RR4 588 aa11.28□□□□□ -0.6
HPS4-204ENST00000422379 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
HPS4-204ENST00000422379 GOLGB1Q14789 3259 aaKnown RBP11.28□□□□□ -0.6
HPS4-204ENST00000422379 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.6
HPS4-204ENST00000422379 ALDH1L1O75891 902 aa11.27□□□□□ -0.6
HPS4-204ENST00000422379 CASP7P55210 303 aa11.27□□□□□ -0.6
HPS4-204ENST00000422379 TCIRG1Q13488 830 aa11.27□□□□□ -0.6
HPS4-204ENST00000422379 EZH2Q15910 746 aaKnown RBP11.27□□□□□ -0.6
HPS4-204ENST00000422379 GIGYF2Q6Y7W6 1299 aaKnown RBP11.27□□□□□ -0.6
HPS4-204ENST00000422379 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.6
HPS4-204ENST00000422379 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.6
HPS4-204ENST00000422379 UTYO14607 1347 aa11.27□□□□□ -0.61
HPS4-204ENST00000422379 PHF14O94880 888 aa11.27□□□□□ -0.61
HPS4-204ENST00000422379 GPTP24298 496 aa11.27□□□□□ -0.61
HPS4-204ENST00000422379 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
HPS4-204ENST00000422379 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
HPS4-204ENST00000422379 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
HPS4-204ENST00000422379 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 GRM8O00222 908 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 EPHA10Q5JZY3 1008 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 SUCLG2Q96I99 432 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
HPS4-204ENST00000422379 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
HPS4-204ENST00000422379 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
HPS4-204ENST00000422379 NUP98P52948 1817 aa11.25□□□□□ -0.61
HPS4-204ENST00000422379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
HPS4-204ENST00000422379 AAMPQ13685 434 aa11.25□□□□□ -0.61
HPS4-204ENST00000422379 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
HPS4-204ENST00000422379 AK7Q96M32 723 aa11.25□□□□□ -0.61
HPS4-204ENST00000422379 RTCBQ9Y3I0 505 aaKnown RBP11.25□□□□□ -0.61
HPS4-204ENST00000422379 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
HPS4-204ENST00000422379 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
HPS4-204ENST00000422379 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
HPS4-204ENST00000422379 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms