RNA–Protein interactions for RNA: ENST00000422361.6

RUNX1T1-204, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-204ENST00000422361 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 C9orf78Q9NZ63 289 aaPredicted RBP12.59□□□□□ -0.39
RUNX1T1-204ENST00000422361 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
RUNX1T1-204ENST00000422361 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
RUNX1T1-204ENST00000422361 PPP1R9BQ96SB3 815 aa12.58□□□□□ -0.4
RUNX1T1-204ENST00000422361 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
RUNX1T1-204ENST00000422361 ZNF445P59923 1031 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 ZDHHC9Q9Y397 364 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 XPCQ01831 940 aaPredicted RBP12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 MCTP1Q6DN14 999 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
RUNX1T1-204ENST00000422361 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 GRM8O00222 908 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 MSNP26038 577 aaKnown RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 NASPP49321 788 aaPredicted RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 BRD1O95696 1058 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 ANXA1P04083 346 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 TERF1P54274 439 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 PDIA6Q15084 440 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 COL15A1P39059 1388 aa12.56□□□□□ -0.4
RUNX1T1-204ENST00000422361 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 TCHHQ07283 1943 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 HIP1O00291 1037 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 PHKG2P15735 406 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 ATF3P18847 181 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 ANP32BQ92688 251 aaKnown RBP12.55□□□□□ -0.4
RUNX1T1-204ENST00000422361 PKP1Q13835 747 aa12.54□□□□□ -0.4
RUNX1T1-204ENST00000422361 EVI5LQ96CN4 794 aa12.54□□□□□ -0.4
RUNX1T1-204ENST00000422361 MAP7D2Q96T17 732 aa12.54□□□□□ -0.4
RUNX1T1-204ENST00000422361 CPDO75976 1380 aa12.54□□□□□ -0.4
RUNX1T1-204ENST00000422361 KCNB2Q92953 911 aa12.54□□□□□ -0.4
RUNX1T1-204ENST00000422361 MBD3O95983 291 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 MEGF6O75095 1541 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 TTC14Q96N46 770 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 IL25Q9H293 177 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 SNRKQ9NRH2 765 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
RUNX1T1-204ENST00000422361 XIRP1Q702N8 1843 aaKnown RBP12.52□□□□□ -0.4
RUNX1T1-204ENST00000422361 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.4
RUNX1T1-204ENST00000422361 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.4
RUNX1T1-204ENST00000422361 SUCLG2Q96I99 432 aa12.52□□□□□ -0.4
RUNX1T1-204ENST00000422361 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.4
RUNX1T1-204ENST00000422361 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 KAZALD1Q96I82 304 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 NLRP2Q9NX02 1062 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 GLI3P10071 1580 aa12.52□□□□□ -0.41
RUNX1T1-204ENST00000422361 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 IGKV5-2P06315 115 aa12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 ZSCAN23Q3MJ62 389 aa12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
RUNX1T1-204ENST00000422361 SASH1O94885 1247 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 MAP4K4O95819 1239 aaPredicted RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 GCKRQ14397 625 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 CAVIN1Q6NZI2 390 aaKnown RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 AACSQ86V21 672 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 ZSCAN31Q96LW9 406 aaPredicted RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
RUNX1T1-204ENST00000422361 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
RUNX1T1-204ENST00000422361 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
RUNX1T1-204ENST00000422361 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms