RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 MAP3K15Q6ZN16 1313 aa24.96■■□□□ 1.59
GCDH-202ENST00000421816 NRXN2Q9P2S2 1712 aa24.96■■□□□ 1.59
GCDH-202ENST00000421816 ERVV-1B6SEH8 477 aa24.96■■□□□ 1.59
GCDH-202ENST00000421816 CCDC30Q5VVM6 783 aa24.96■■□□□ 1.59
GCDH-202ENST00000421816 FHDC1Q9C0D6 1143 aaPredicted RBP24.96■■□□□ 1.59
GCDH-202ENST00000421816 PARP3Q9Y6F1 533 aa24.96■■□□□ 1.59
GCDH-202ENST00000421816 AFDNP55196 1824 aaKnown RBP24.96■■□□□ 1.59
GCDH-202ENST00000421816 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.58
GCDH-202ENST00000421816 VAMP4O75379 141 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 HNRNPUQ00839 825 aaKnown RBP eCLIP24.95■■□□□ 1.58
GCDH-202ENST00000421816 TBC1D9BQ66K14 1250 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 KIF6Q6ZMV9 814 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 TRMT2AQ8IZ69 625 aaKnown RBP24.95■■□□□ 1.58
GCDH-202ENST00000421816 CDCA7LQ96GN5 454 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 HYPKQ9NX55 129 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 KIF13BQ9NQT8 1826 aa24.95■■□□□ 1.58
GCDH-202ENST00000421816 HLFQ16534 295 aa24.94■■□□□ 1.58
GCDH-202ENST00000421816 COPS6Q7L5N1 327 aa24.94■■□□□ 1.58
GCDH-202ENST00000421816 XAGE3Q8WTP9 111 aa24.94■■□□□ 1.58
GCDH-202ENST00000421816 ZNF652Q9Y2D9 606 aa24.94■■□□□ 1.58
GCDH-202ENST00000421816 SYT17Q9BSW7 474 aa24.92■■□□□ 1.58
GCDH-202ENST00000421816 CACNA1FO60840 1977 aa24.91■■□□□ 1.58
GCDH-202ENST00000421816 BICDL1Q6ZP65 573 aa24.91■■□□□ 1.58
GCDH-202ENST00000421816 ZBTB3Q9H5J0 574 aa24.91■■□□□ 1.58
GCDH-202ENST00000421816 CD2APQ9Y5K6 639 aa24.91■■□□□ 1.58
GCDH-202ENST00000421816 C10orf71Q711Q0 1435 aa24.91■■□□□ 1.58
GCDH-202ENST00000421816 ATP10DQ9P241 1426 aa24.9■■□□□ 1.58
GCDH-202ENST00000421816 AIMP1Q12904 312 aaKnown RBP24.9■■□□□ 1.58
GCDH-202ENST00000421816 GIGYF2Q6Y7W6 1299 aaKnown RBP24.9■■□□□ 1.58
GCDH-202ENST00000421816 CARMIL3Q8ND23 1372 aa24.9■■□□□ 1.58
GCDH-202ENST00000421816 SERPINB2P05120 415 aa24.89■■□□□ 1.58
GCDH-202ENST00000421816 SETDB2Q96T68 719 aa24.89■■□□□ 1.58
GCDH-202ENST00000421816 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.58
GCDH-202ENST00000421816 ANKRD36CQ5JPF3 1778 aa24.89■■□□□ 1.57
GCDH-202ENST00000421816 KLHL34Q8N239 644 aa24.88■■□□□ 1.57
GCDH-202ENST00000421816 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
GCDH-202ENST00000421816 KIAA1551Q9HCM1 1747 aa24.87■■□□□ 1.57
GCDH-202ENST00000421816 TCERG1O14776 1098 aaKnown RBP24.87■■□□□ 1.57
GCDH-202ENST00000421816 PLBD2Q8NHP8 589 aa24.87■■□□□ 1.57
GCDH-202ENST00000421816 ARFGEF2Q9Y6D5 1785 aa24.87■■□□□ 1.57
GCDH-202ENST00000421816 ANKRD13DQ6ZTN6 518 aa24.86■■□□□ 1.57
GCDH-202ENST00000421816 NIP7Q9Y221 180 aaKnown RBP eCLIP24.86■■□□□ 1.57
GCDH-202ENST00000421816 ZBED9Q6R2W3 1325 aa24.86■■□□□ 1.57
GCDH-202ENST00000421816 ZNF34Q8IZ26 560 aa24.85■■□□□ 1.57
GCDH-202ENST00000421816 NLGN2Q8NFZ4 835 aa24.85■■□□□ 1.57
GCDH-202ENST00000421816 SLC4A2P04920 1241 aa24.84■■□□□ 1.57
GCDH-202ENST00000421816 HSP90AB3PQ58FF7 597 aa24.82■■□□□ 1.56
GCDH-202ENST00000421816 PRR5LQ6MZQ0 368 aa24.82■■□□□ 1.56
GCDH-202ENST00000421816 G2E3Q7L622 706 aa24.82■■□□□ 1.56
GCDH-202ENST00000421816 ANKRD31Q8N7Z5 1873 aa24.82■■□□□ 1.56
GCDH-202ENST00000421816 UBN2Q6ZU65 1347 aa24.82■■□□□ 1.56
GCDH-202ENST00000421816 N4BP2Q86UW6 1770 aaPredicted RBP24.81■■□□□ 1.56
GCDH-202ENST00000421816 TCIRG1Q13488 830 aa24.81■■□□□ 1.56
GCDH-202ENST00000421816 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
GCDH-202ENST00000421816 GPTP24298 496 aa24.8■■□□□ 1.56
GCDH-202ENST00000421816 TGFB2P61812 414 aa24.8■■□□□ 1.56
GCDH-202ENST00000421816 NBPF5PQ86XG9 351 aaPredicted RBP24.8■■□□□ 1.56
GCDH-202ENST00000421816 ZNF428Q96B54 188 aa24.8■■□□□ 1.56
GCDH-202ENST00000421816 IBTKQ9P2D0 1353 aaPredicted RBP24.8■■□□□ 1.56
GCDH-202ENST00000421816 DDX58O95786 925 aaKnown RBP24.79■■□□□ 1.56
GCDH-202ENST00000421816 CT47B1P0C2W7 299 aaPredicted RBP24.79■■□□□ 1.56
GCDH-202ENST00000421816 PARP10Q53GL7 1025 aa24.79■■□□□ 1.56
GCDH-202ENST00000421816 CNBD1Q8NA66 436 aa24.79■■□□□ 1.56
GCDH-202ENST00000421816 FLIIQ13045 1269 aa24.78■■□□□ 1.56
GCDH-202ENST00000421816 SUSD4Q5VX71 490 aa24.78■■□□□ 1.56
GCDH-202ENST00000421816 TPTE2Q6XPS3 522 aa24.78■■□□□ 1.56
GCDH-202ENST00000421816 RIC3Q7Z5B4 369 aa24.78■■□□□ 1.56
GCDH-202ENST00000421816 KSR2Q6VAB6 950 aa24.77■■□□□ 1.56
GCDH-202ENST00000421816 ISCA1Q9BUE6 129 aa24.77■■□□□ 1.56
GCDH-202ENST00000421816 NYXQ9GZU5 481 aa24.77■■□□□ 1.56
GCDH-202ENST00000421816 ADCY9O60503 1353 aa24.77■■□□□ 1.56
GCDH-202ENST00000421816 BRCA1P38398 1863 aaKnown RBP24.77■■□□□ 1.56
GCDH-202ENST00000421816 DLEC1Q9Y238 1755 aa24.76■■□□□ 1.55
GCDH-202ENST00000421816 NLRP10Q86W26 655 aa24.76■■□□□ 1.55
GCDH-202ENST00000421816 BRIP1Q9BX63 1249 aa24.76■■□□□ 1.55
GCDH-202ENST00000421816 PI4KAP2A4QPH2 592 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 FAM177BA6PVY3 158 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 NTSR2O95665 410 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 ST5P78524 1137 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 TRIM28Q13263 835 aaKnown RBP24.75■■□□□ 1.55
GCDH-202ENST00000421816 PPP1R42Q7Z4L9 355 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 PI4KAP1Q8N8J0 262 aa24.75■■□□□ 1.55
GCDH-202ENST00000421816 A0A0G2JLW4 131 aa24.74■■□□□ 1.55
GCDH-202ENST00000421816 DPEP1P16444 411 aa24.74■■□□□ 1.55
GCDH-202ENST00000421816 ALDH1L2Q3SY69 923 aa24.74■■□□□ 1.55
GCDH-202ENST00000421816 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
GCDH-202ENST00000421816 METTL22Q9BUU2 404 aaPredicted RBP24.74■■□□□ 1.55
GCDH-202ENST00000421816 MAP3K2Q9Y2U5 619 aa24.74■■□□□ 1.55
GCDH-202ENST00000421816 NPHP1O15259 732 aa24.73■■□□□ 1.55
GCDH-202ENST00000421816 KCNA3P22001 575 aa24.73■■□□□ 1.55
GCDH-202ENST00000421816 SSH1Q8WYL5 1049 aa24.73■■□□□ 1.55
GCDH-202ENST00000421816 COL11A2P13942 1736 aaPredicted RBP24.72■■□□□ 1.55
GCDH-202ENST00000421816 RIC1Q4ADV7 1423 aa24.72■■□□□ 1.55
GCDH-202ENST00000421816 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
GCDH-202ENST00000421816 ATP5J2-PTCD1G3V325 749 aa24.72■■□□□ 1.55
GCDH-202ENST00000421816 PDE6BP35913 854 aa24.72■■□□□ 1.55
GCDH-202ENST00000421816 FKBP5Q13451 457 aaPredicted RBP24.72■■□□□ 1.55
GCDH-202ENST00000421816 UTP14AQ9BVJ6 771 aaKnown RBP24.72■■□□□ 1.55
GCDH-202ENST00000421816 CHRNA5P30532 468 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms