RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
BDNF-209ENST00000420794 KIF1BPQ96EK5 621 aa9.1□□□□□ -0.95
BDNF-209ENST00000420794 EXOC6BQ9Y2D4 811 aa9.1□□□□□ -0.95
BDNF-209ENST00000420794 FBXO41Q8TF61 875 aa9.09□□□□□ -0.95
BDNF-209ENST00000420794 SIL1Q9H173 461 aa9.09□□□□□ -0.95
BDNF-209ENST00000420794 PHF14O94880 888 aa9.09□□□□□ -0.95
BDNF-209ENST00000420794 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
BDNF-209ENST00000420794 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
BDNF-209ENST00000420794 KDM6AO15550 1401 aaPredicted RBP9.09□□□□□ -0.96
BDNF-209ENST00000420794 APBA3O96018 575 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 PDE4AP27815 886 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 IFIT5Q13325 482 aaKnown RBP9.09□□□□□ -0.96
BDNF-209ENST00000420794 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 TNS2Q63HR2 1409 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 CEP85Q6P2H3 762 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 RILPL2Q969X0 211 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 NEUROD6Q96NK8 337 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 MPHOSPH8Q99549 860 aa9.09□□□□□ -0.96
BDNF-209ENST00000420794 NIP7Q9Y221 180 aaKnown RBP eCLIP9.09□□□□□ -0.96
BDNF-209ENST00000420794 COL14A1Q05707 1796 aaKnown RBP9.08□□□□□ -0.96
BDNF-209ENST00000420794 HSP90AA1P07900 732 aaKnown RBP9.08□□□□□ -0.96
BDNF-209ENST00000420794 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
BDNF-209ENST00000420794 BEND3Q5T5X7 828 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 TRIM37O94972 964 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 MCCP23508 829 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 GCKRQ14397 625 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 PARP10Q53GL7 1025 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 CEP126Q9P2H0 1117 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 KCNJ4P48050 445 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 TCIRG1Q13488 830 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 TTLL7Q6ZT98 887 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 ZBTB1Q9Y2K1 713 aa9.08□□□□□ -0.96
BDNF-209ENST00000420794 KCNQ2O43526 872 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 BECN1Q14457 450 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 HOMEZQ8IX15 550 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 UTP14AQ9BVJ6 771 aaKnown RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 NHSL1Q5SYE7 1610 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 PHRF1Q9P1Y6 1649 aaKnown RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 NEURL1BA8MQ27 555 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 USP44Q9H0E7 712 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 TFCP2L1Q9NZI6 479 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 IGHMBP2P38935 993 aaKnown RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 PKNOX2Q96KN3 472 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
BDNF-209ENST00000420794 DCTPP1Q9H773 170 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 MAP3K15Q6ZN16 1313 aa9.07□□□□□ -0.96
BDNF-209ENST00000420794 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 NBPF5PQ86XG9 351 aaPredicted RBP9.06□□□□□ -0.96
BDNF-209ENST00000420794 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
BDNF-209ENST00000420794 NYXQ9GZU5 481 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
BDNF-209ENST00000420794 LMBR1LQ6UX01 489 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 SMC5Q8IY18 1101 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 TPTE2Q6XPS3 522 aa9.06□□□□□ -0.96
BDNF-209ENST00000420794 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
BDNF-209ENST00000420794 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
BDNF-209ENST00000420794 MFAP1P55081 439 aaKnown RBP9.05□□□□□ -0.96
BDNF-209ENST00000420794 NUCB1Q02818 461 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 AACSQ86V21 672 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 VPS37DQ86XT2 251 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 RUFY2Q8WXA3 655 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
BDNF-209ENST00000420794 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 G3V3G9 751 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 IRS4O14654 1257 aaPredicted RBP9.05□□□□□ -0.96
BDNF-209ENST00000420794 BAG6P46379 1132 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 DIAPH3Q9NSV4 1193 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 AKAP2Q9Y2D5 859 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 USP54Q70EL1 1684 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 CCDC152Q4G0S7 254 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 CNTROBQ8N137 903 aa9.05□□□□□ -0.96
BDNF-209ENST00000420794 BICC1Q9H694 974 aaKnown RBP9.05□□□□□ -0.96
BDNF-209ENST00000420794 CCDC158Q5M9N0 1113 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 CDC5LQ99459 802 aaKnown RBP9.04□□□□□ -0.96
BDNF-209ENST00000420794 SLIT2O94813 1529 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 NLRP3Q96P20 1036 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 CDC45O75419 566 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 METTL24Q5JXM2 366 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 LDHAL6AQ6ZMR3 332 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 RHPN1Q8TCX5 695 aa9.04□□□□□ -0.96
BDNF-209ENST00000420794 XIRP1Q702N8 1843 aaKnown RBP9.04□□□□□ -0.96
BDNF-209ENST00000420794 BCL9O00512 1426 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
BDNF-209ENST00000420794 REC8O95072 547 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 MX1P20591 662 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 NBPF14Q5TI25 921 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 SUCLG2Q96I99 432 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 LMO7Q8WWI1 1683 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 ST5P78524 1137 aa9.03□□□□□ -0.96
BDNF-209ENST00000420794 SLC27A3Q5K4L6 730 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms