RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 CTCFP49711 727 aaPredicted RBP18.49■□□□□ 0.55
NOD1-205ENST00000419799 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
NOD1-205ENST00000419799 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
NOD1-205ENST00000419799 MASTLQ96GX5 879 aa18.49■□□□□ 0.55
NOD1-205ENST00000419799 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
NOD1-205ENST00000419799 ST5P78524 1137 aa18.48■□□□□ 0.55
NOD1-205ENST00000419799 ZNF790Q6PG37 636 aa18.48■□□□□ 0.55
NOD1-205ENST00000419799 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
NOD1-205ENST00000419799 TAF1DQ9H5J8 278 aaPredicted RBP18.48■□□□□ 0.55
NOD1-205ENST00000419799 SCN4AP35499 1836 aa18.48■□□□□ 0.55
NOD1-205ENST00000419799 SLX4Q8IY92 1834 aa18.48■□□□□ 0.55
NOD1-205ENST00000419799 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
NOD1-205ENST00000419799 TMEM88BA6NKF7 163 aa18.47■□□□□ 0.55
NOD1-205ENST00000419799 ITGBL1O95965 494 aaPredicted RBP18.47■□□□□ 0.55
NOD1-205ENST00000419799 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
NOD1-205ENST00000419799 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
NOD1-205ENST00000419799 NPHP1O15259 732 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 CAMTA2O94983 1202 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 VEGFBP49765 207 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 WBP1LQ9NX94 342 aa18.46■□□□□ 0.55
NOD1-205ENST00000419799 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
NOD1-205ENST00000419799 TEFQ10587 303 aa18.45■□□□□ 0.54
NOD1-205ENST00000419799 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
NOD1-205ENST00000419799 CCDC93Q567U6 631 aa18.44■□□□□ 0.54
NOD1-205ENST00000419799 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
NOD1-205ENST00000419799 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
NOD1-205ENST00000419799 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
NOD1-205ENST00000419799 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
NOD1-205ENST00000419799 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
NOD1-205ENST00000419799 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 ADAMTSL1Q8N6G6 1762 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 RASSF10A6NK89 507 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 A1BGP04217 495 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
NOD1-205ENST00000419799 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
NOD1-205ENST00000419799 HACL1Q9UJ83 578 aa18.42■□□□□ 0.54
NOD1-205ENST00000419799 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
NOD1-205ENST00000419799 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
NOD1-205ENST00000419799 LBX1P52954 281 aa18.41■□□□□ 0.54
NOD1-205ENST00000419799 EAPPQ56P03 285 aaPredicted RBP18.41■□□□□ 0.54
NOD1-205ENST00000419799 CLEC4GQ6UXB4 293 aa18.41■□□□□ 0.54
NOD1-205ENST00000419799 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
NOD1-205ENST00000419799 SLC34A2O95436 690 aa18.4■□□□□ 0.54
NOD1-205ENST00000419799 NPR1P16066 1061 aa18.4■□□□□ 0.54
NOD1-205ENST00000419799 EPHX2P34913 555 aa18.4■□□□□ 0.54
NOD1-205ENST00000419799 DEFB115Q30KQ5 88 aa18.4■□□□□ 0.54
NOD1-205ENST00000419799 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
NOD1-205ENST00000419799 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
NOD1-205ENST00000419799 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
NOD1-205ENST00000419799 RTKN2Q8IZC4 609 aa18.39■□□□□ 0.53
NOD1-205ENST00000419799 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
NOD1-205ENST00000419799 NUDCQ9Y266 331 aa18.39■□□□□ 0.53
NOD1-205ENST00000419799 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
NOD1-205ENST00000419799 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
NOD1-205ENST00000419799 HSPA8P11142 646 aaKnown RBP18.38■□□□□ 0.53
NOD1-205ENST00000419799 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
NOD1-205ENST00000419799 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
NOD1-205ENST00000419799 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
NOD1-205ENST00000419799 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
NOD1-205ENST00000419799 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
NOD1-205ENST00000419799 FZD9O00144 591 aa18.37■□□□□ 0.53
NOD1-205ENST00000419799 RGL2O15211 777 aa18.37■□□□□ 0.53
NOD1-205ENST00000419799 ABHD8Q96I13 439 aa18.37■□□□□ 0.53
NOD1-205ENST00000419799 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
NOD1-205ENST00000419799 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
NOD1-205ENST00000419799 GPC2Q8N158 579 aa18.36■□□□□ 0.53
NOD1-205ENST00000419799 WDR33Q9C0J8 1336 aaKnown RBP18.36■□□□□ 0.53
NOD1-205ENST00000419799 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
NOD1-205ENST00000419799 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
NOD1-205ENST00000419799 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
NOD1-205ENST00000419799 KCNQ3O43525 872 aa18.35■□□□□ 0.53
NOD1-205ENST00000419799 ALDH1B1P30837 517 aa18.35■□□□□ 0.53
NOD1-205ENST00000419799 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
NOD1-205ENST00000419799 MAP1SQ66K74 1059 aaPredicted RBP18.35■□□□□ 0.53
NOD1-205ENST00000419799 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
NOD1-205ENST00000419799 OLFM4Q6UX06 510 aa18.33■□□□□ 0.52
NOD1-205ENST00000419799 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
NOD1-205ENST00000419799 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
NOD1-205ENST00000419799 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
NOD1-205ENST00000419799 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
NOD1-205ENST00000419799 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
NOD1-205ENST00000419799 PSMD1Q99460 953 aa18.32■□□□□ 0.52
NOD1-205ENST00000419799 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
NOD1-205ENST00000419799 ABT1Q9ULW3 272 aaKnown RBP18.32■□□□□ 0.52
NOD1-205ENST00000419799 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
NOD1-205ENST00000419799 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
NOD1-205ENST00000419799 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
NOD1-205ENST00000419799 RALBP1Q15311 655 aa18.31■□□□□ 0.52
NOD1-205ENST00000419799 JDP2Q8WYK2 163 aa18.31■□□□□ 0.52
NOD1-205ENST00000419799 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
NOD1-205ENST00000419799 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
NOD1-205ENST00000419799 ECE1P42892 770 aa18.29■□□□□ 0.52
NOD1-205ENST00000419799 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
NOD1-205ENST00000419799 RGS19P49795 217 aa18.28■□□□□ 0.52
NOD1-205ENST00000419799 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
NOD1-205ENST00000419799 CRY2Q49AN0 593 aa18.28■□□□□ 0.52
NOD1-205ENST00000419799 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms