RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 BCORQ6W2J9 1755 aa16.36■□□□□ 0.21
ATG4B-208ENST00000419606 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
ATG4B-208ENST00000419606 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
ATG4B-208ENST00000419606 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
ATG4B-208ENST00000419606 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-208ENST00000419606 PTPRCP08575 1304 aa16.35■□□□□ 0.21
ATG4B-208ENST00000419606 NUP98P52948 1817 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 CAMTA2O94983 1202 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 RLBP1P12271 317 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 SSFA2P28290 1259 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 KSR2Q6VAB6 950 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 PDGFDQ9GZP0 370 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-208ENST00000419606 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
ATG4B-208ENST00000419606 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.21
ATG4B-208ENST00000419606 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
ATG4B-208ENST00000419606 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
ATG4B-208ENST00000419606 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
ATG4B-208ENST00000419606 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
ATG4B-208ENST00000419606 ARHGAP45Q92619 1136 aa16.33■□□□□ 0.2
ATG4B-208ENST00000419606 A0A087WZG4 1122 aa16.32■□□□□ 0.2
ATG4B-208ENST00000419606 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
ATG4B-208ENST00000419606 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
ATG4B-208ENST00000419606 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-208ENST00000419606 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
ATG4B-208ENST00000419606 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
ATG4B-208ENST00000419606 DNAAF4Q8WXU2 420 aa16.32■□□□□ 0.2
ATG4B-208ENST00000419606 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
ATG4B-208ENST00000419606 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
ATG4B-208ENST00000419606 ABCC4O15439 1325 aa16.31■□□□□ 0.2
ATG4B-208ENST00000419606 USP42Q9H9J4 1324 aaKnown RBP16.31■□□□□ 0.2
ATG4B-208ENST00000419606 MSH5O43196 834 aa16.31■□□□□ 0.2
ATG4B-208ENST00000419606 ADRA2BP18089 450 aa16.31■□□□□ 0.2
ATG4B-208ENST00000419606 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
ATG4B-208ENST00000419606 RFC4P35249 363 aa16.31■□□□□ 0.2
ATG4B-208ENST00000419606 MYD88Q99836 296 aa16.31■□□□□ 0.2
ATG4B-208ENST00000419606 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
ATG4B-208ENST00000419606 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
ATG4B-208ENST00000419606 GIGYF2Q6Y7W6 1299 aaKnown RBP16.3■□□□□ 0.2
ATG4B-208ENST00000419606 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
ATG4B-208ENST00000419606 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
ATG4B-208ENST00000419606 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-208ENST00000419606 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
ATG4B-208ENST00000419606 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
ATG4B-208ENST00000419606 ZPR1O75312 459 aa16.29■□□□□ 0.2
ATG4B-208ENST00000419606 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
ATG4B-208ENST00000419606 GYS1P13807 737 aa16.29■□□□□ 0.2
ATG4B-208ENST00000419606 GPTP24298 496 aa16.29■□□□□ 0.2
ATG4B-208ENST00000419606 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
ATG4B-208ENST00000419606 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
ATG4B-208ENST00000419606 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
ATG4B-208ENST00000419606 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-208ENST00000419606 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-208ENST00000419606 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-208ENST00000419606 FKBP8Q14318 412 aa16.28■□□□□ 0.2
ATG4B-208ENST00000419606 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
ATG4B-208ENST00000419606 TCIRG1Q13488 830 aa16.27■□□□□ 0.2
ATG4B-208ENST00000419606 MSL1Q68DK7 614 aa16.27■□□□□ 0.2
ATG4B-208ENST00000419606 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
ATG4B-208ENST00000419606 FTSJ3Q8IY81 847 aaKnown RBP16.27■□□□□ 0.2
ATG4B-208ENST00000419606 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
ATG4B-208ENST00000419606 COG6Q9Y2V7 657 aa16.27■□□□□ 0.2
ATG4B-208ENST00000419606 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 INTS3Q68E01 1043 aaKnown RBP16.26■□□□□ 0.19
ATG4B-208ENST00000419606 ZNF34Q8IZ26 560 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 ATP10DQ9P241 1426 aa16.26■□□□□ 0.19
ATG4B-208ENST00000419606 NEURL1BA8MQ27 555 aa16.25■□□□□ 0.19
ATG4B-208ENST00000419606 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
ATG4B-208ENST00000419606 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
ATG4B-208ENST00000419606 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-208ENST00000419606 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
ATG4B-208ENST00000419606 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATG4B-208ENST00000419606 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
ATG4B-208ENST00000419606 CCT4P50991 539 aaKnown RBP16.23■□□□□ 0.19
ATG4B-208ENST00000419606 NFIXQ14938 502 aa16.23■□□□□ 0.19
ATG4B-208ENST00000419606 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
ATG4B-208ENST00000419606 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
ATG4B-208ENST00000419606 MS4A1P11836 297 aa16.22■□□□□ 0.19
ATG4B-208ENST00000419606 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
ATG4B-208ENST00000419606 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
ATG4B-208ENST00000419606 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-208ENST00000419606 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
ATG4B-208ENST00000419606 RGL2O15211 777 aa16.21■□□□□ 0.19
ATG4B-208ENST00000419606 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms