RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 DNAAF4Q8WXU2 420 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 ALKQ9UM73 1620 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 A0A1W2PP64 1363 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 FAM196AQ6ZSG2 479 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
UBR4-206ENST00000419533 PDILTQ8N807 584 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 ACSBG1Q96GR2 724 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
UBR4-206ENST00000419533 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
UBR4-206ENST00000419533 DCTN1Q14203 1278 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.81
UBR4-206ENST00000419533 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 DACH1Q9UI36 760 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 FRMPD1Q5SYB0 1578 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.81
UBR4-206ENST00000419533 HOXC9P31274 260 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 ZNF76P36508 570 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 TMEM57Q8N5G2 664 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 SMARCE1Q969G3 411 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 SPATA31A3Q5VYP0 1347 aa9.96□□□□□ -0.81
UBR4-206ENST00000419533 MAP3K12Q12852 859 aa9.96□□□□□ -0.82
UBR4-206ENST00000419533 RFC4P35249 363 aa9.96□□□□□ -0.82
UBR4-206ENST00000419533 E9PCH4 1651 aa9.96□□□□□ -0.82
UBR4-206ENST00000419533 APBA3O96018 575 aa9.96□□□□□ -0.82
UBR4-206ENST00000419533 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.82
UBR4-206ENST00000419533 PPP1R42Q7Z4L9 355 aa9.96□□□□□ -0.82
UBR4-206ENST00000419533 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
UBR4-206ENST00000419533 SBNO1A3KN83 1393 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 WDR33Q9C0J8 1336 aaKnown RBP9.95□□□□□ -0.82
UBR4-206ENST00000419533 HSP90AB2PQ58FF8 381 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 KRT27Q7Z3Y8 459 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
UBR4-206ENST00000419533 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
UBR4-206ENST00000419533 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 JAKMIP1Q96N16 626 aaKnown RBP9.95□□□□□ -0.82
UBR4-206ENST00000419533 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
UBR4-206ENST00000419533 CDR1P51861 262 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 SBNO2Q9Y2G9 1366 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 MROH2AA6NES4 1674 aa9.95□□□□□ -0.82
UBR4-206ENST00000419533 MKNK2Q9HBH9 465 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 PTPRCP08575 1304 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 TFCP2L1Q9NZI6 479 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 MX1P20591 662 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 CEBPZQ03701 1054 aaKnown RBP9.94□□□□□ -0.82
UBR4-206ENST00000419533 LARP1BQ659C4 914 aaKnown RBP9.94□□□□□ -0.82
UBR4-206ENST00000419533 ZHX3Q9H4I2 956 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
UBR4-206ENST00000419533 LAMC1P11047 1609 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 TNNT3P45378 269 aaPredicted RBP9.94□□□□□ -0.82
UBR4-206ENST00000419533 ST5P78524 1137 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 TNIP1Q15025 636 aa9.94□□□□□ -0.82
UBR4-206ENST00000419533 DDX46Q7L014 1031 aaKnown RBP9.94□□□□□ -0.82
UBR4-206ENST00000419533 FIBPO43427 364 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 AKAP4Q5JQC9 854 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 EXOC6BQ9Y2D4 811 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 TNS3Q68CZ2 1445 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 SNRPA1P09661 255 aaKnown RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 KRT85P78386 507 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 DCCP43146 1447 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 SMC2O95347 1197 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 ME1P48163 572 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 MNS1Q8NEH6 495 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 CWC25Q9NXE8 425 aaPredicted RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 POLR3AO14802 1390 aaPredicted RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 DCAF5Q96JK2 942 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 NAPBQ9H115 298 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 BRPF3Q9ULD4 1205 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 MYO6Q9UM54 1294 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 ASXL1Q8IXJ9 1541 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 K7ELQ4 463 aaPredicted RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 DHX8Q14562 1220 aaKnown RBP9.93□□□□□ -0.82
UBR4-206ENST00000419533 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
UBR4-206ENST00000419533 C6orf229H3BNL8 230 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 CCP110O43303 1012 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 PDCL3Q9H2J4 239 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 LDHCP07864 332 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
UBR4-206ENST00000419533 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
UBR4-206ENST00000419533 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 MAP3K19Q56UN5 1328 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ATP7BP35670 1465 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 PAF1Q8N7H5 531 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 TESK2Q96S53 571 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 C1orf167Q5SNV9 1468 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 CCDC196A0A1B0GTZ2 297 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 PRPF40AO75400 957 aaKnown RBP9.92□□□□□ -0.82
UBR4-206ENST00000419533 GPTP24298 496 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
UBR4-206ENST00000419533 SSH1Q8WYL5 1049 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms