RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 LTBP3Q9NS15 1303 aa17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 POTECB2RU33 542 aa17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 C21orf2O43822 256 aa17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 ZNF622Q969S3 477 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDLIM4-203ENST00000418373 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-203ENST00000418373 SRGNP10124 158 aa17.03■□□□□ 0.32
PDLIM4-203ENST00000418373 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
PDLIM4-203ENST00000418373 CLEC4GQ6UXB4 293 aa17.03■□□□□ 0.32
PDLIM4-203ENST00000418373 NBPF26B4DH59 902 aa17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 RGL2O15211 777 aa17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 NPM2Q86SE8 214 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 NBPF15Q8N660 670 aa17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-203ENST00000418373 NUP98P52948 1817 aa17.01■□□□□ 0.31
PDLIM4-203ENST00000418373 ST5P78524 1137 aa17.01■□□□□ 0.31
PDLIM4-203ENST00000418373 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
PDLIM4-203ENST00000418373 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
PDLIM4-203ENST00000418373 CNKSR1Q969H4 720 aa17.01■□□□□ 0.31
PDLIM4-203ENST00000418373 ERFEQ4G0M1 354 aa17■□□□□ 0.31
PDLIM4-203ENST00000418373 MASTLQ96GX5 879 aa17■□□□□ 0.31
PDLIM4-203ENST00000418373 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
PDLIM4-203ENST00000418373 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
PDLIM4-203ENST00000418373 SCN4AP35499 1836 aa16.99■□□□□ 0.31
PDLIM4-203ENST00000418373 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-203ENST00000418373 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
PDLIM4-203ENST00000418373 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
PDLIM4-203ENST00000418373 DPY19L2Q6NUT2 758 aa16.98■□□□□ 0.31
PDLIM4-203ENST00000418373 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-203ENST00000418373 NPHP1O15259 732 aa16.97■□□□□ 0.31
PDLIM4-203ENST00000418373 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-203ENST00000418373 SOGA3Q5TF21 947 aa16.97■□□□□ 0.31
PDLIM4-203ENST00000418373 NIP7Q9Y221 180 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDLIM4-203ENST00000418373 NPR1P16066 1061 aa16.95■□□□□ 0.3
PDLIM4-203ENST00000418373 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
PDLIM4-203ENST00000418373 MIS18AQ9NYP9 233 aa16.95■□□□□ 0.3
PDLIM4-203ENST00000418373 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
PDLIM4-203ENST00000418373 HLFQ16534 295 aa16.94■□□□□ 0.3
PDLIM4-203ENST00000418373 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
PDLIM4-203ENST00000418373 ADAMTSL1Q8N6G6 1762 aa16.93■□□□□ 0.3
PDLIM4-203ENST00000418373 DDNO94850 711 aaPredicted RBP16.93■□□□□ 0.3
PDLIM4-203ENST00000418373 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
PDLIM4-203ENST00000418373 L3MBTL3Q96JM7 780 aaPredicted RBP16.92■□□□□ 0.3
PDLIM4-203ENST00000418373 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 RIC1Q4ADV7 1423 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 COL13A1Q5TAT6 717 aaPredicted RBP16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 PNISRQ8TF01 805 aaKnown RBP16.91■□□□□ 0.3
PDLIM4-203ENST00000418373 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
PDLIM4-203ENST00000418373 NFE2L2Q16236 605 aa16.9■□□□□ 0.3
PDLIM4-203ENST00000418373 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
PDLIM4-203ENST00000418373 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
PDLIM4-203ENST00000418373 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
PDLIM4-203ENST00000418373 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
PDLIM4-203ENST00000418373 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
PDLIM4-203ENST00000418373 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
PDLIM4-203ENST00000418373 NEFMP07197 916 aa16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 RTKN2Q8IZC4 609 aa16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 PASKQ96RG2 1323 aa16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 COL4A5P29400 1685 aa16.88■□□□□ 0.29
PDLIM4-203ENST00000418373 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 ALDH1B1P30837 517 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 NYXQ9GZU5 481 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 TAF1DQ9H5J8 278 aaPredicted RBP16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 CREBZFQ9NS37 354 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
PDLIM4-203ENST00000418373 LDHDQ86WU2 507 aa16.86■□□□□ 0.29
PDLIM4-203ENST00000418373 NUTM1Q86Y26 1132 aa16.86■□□□□ 0.29
PDLIM4-203ENST00000418373 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
PDLIM4-203ENST00000418373 LAMB2P55268 1798 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 FZD9O00144 591 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 HSPA1AP0DMV8 641 aaKnown RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 HSPA1BP0DMV9 641 aaKnown RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 PSMD1Q99460 953 aa16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
PDLIM4-203ENST00000418373 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
PDLIM4-203ENST00000418373 MYL6BP14649 208 aa16.84■□□□□ 0.29
PDLIM4-203ENST00000418373 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
PDLIM4-203ENST00000418373 NTSR2O95665 410 aa16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 GPTP24298 496 aa16.83■□□□□ 0.28
PDLIM4-203ENST00000418373 SUSD4Q5VX71 490 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms