RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 IP6K1Q92551 441 aa14.32□□□□□ -0.12
LIMK1-202ENST00000418310 PIK3C2AO00443 1686 aa14.32□□□□□ -0.12
LIMK1-202ENST00000418310 POLA2Q14181 598 aa14.31□□□□□ -0.12
LIMK1-202ENST00000418310 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
LIMK1-202ENST00000418310 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
LIMK1-202ENST00000418310 FAM13BQ9NYF5 915 aa14.31□□□□□ -0.12
LIMK1-202ENST00000418310 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.31□□□□□ -0.12
LIMK1-202ENST00000418310 STX6O43752 255 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 GJB2P29033 226 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
LIMK1-202ENST00000418310 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
LIMK1-202ENST00000418310 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 ADCY9O60503 1353 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-202ENST00000418310 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 CHGBP05060 677 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 FOSBP53539 338 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-202ENST00000418310 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
LIMK1-202ENST00000418310 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 PLEKHO1Q53GL0 409 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 BICC1Q9H694 974 aaKnown RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
LIMK1-202ENST00000418310 NALCNQ8IZF0 1738 aa14.29□□□□□ -0.12
LIMK1-202ENST00000418310 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-202ENST00000418310 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
LIMK1-202ENST00000418310 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
LIMK1-202ENST00000418310 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
LIMK1-202ENST00000418310 FSD1Q9BTV5 496 aa14.28□□□□□ -0.12
LIMK1-202ENST00000418310 RNMTO43148 476 aaKnown RBP14.28□□□□□ -0.12
LIMK1-202ENST00000418310 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
LIMK1-202ENST00000418310 NOL7Q9UMY1 257 aaKnown RBP14.28□□□□□ -0.12
LIMK1-202ENST00000418310 VSIG10Q8N0Z9 540 aa14.28□□□□□ -0.12
LIMK1-202ENST00000418310 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
LIMK1-202ENST00000418310 AXIN2Q9Y2T1 843 aa14.28□□□□□ -0.12
LIMK1-202ENST00000418310 OFD1O75665 1012 aa14.27□□□□□ -0.12
LIMK1-202ENST00000418310 GCP02774 474 aa14.27□□□□□ -0.12
LIMK1-202ENST00000418310 G3BP1Q13283 466 aaKnown RBP eCLIP14.27□□□□□ -0.12
LIMK1-202ENST00000418310 NMIQ13287 307 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-202ENST00000418310 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-202ENST00000418310 PDLIM2Q96JY6 352 aa14.27□□□□□ -0.12
LIMK1-202ENST00000418310 TTC12Q9H892 705 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-202ENST00000418310 ZKSCAN5Q9Y2L8 839 aa14.27□□□□□ -0.12
LIMK1-202ENST00000418310 TCHHQ07283 1943 aa14.27□□□□□ -0.12
LIMK1-202ENST00000418310 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.13
LIMK1-202ENST00000418310 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-202ENST00000418310 TTC14Q96N46 770 aa14.27□□□□□ -0.13
LIMK1-202ENST00000418310 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
LIMK1-202ENST00000418310 RBM8AQ9Y5S9 174 aaKnown RBP14.27□□□□□ -0.13
LIMK1-202ENST00000418310 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-202ENST00000418310 CAMK4Q16566 473 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 FAM208AQ9UK61 1670 aaKnown RBP14.26□□□□□ -0.13
LIMK1-202ENST00000418310 F13A1P00488 732 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 GPATCH3Q96I76 525 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 NLRP2Q9NX02 1062 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-202ENST00000418310 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 ME3Q16798 604 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 XRN1Q8IZH2 1706 aaKnown RBP14.26□□□□□ -0.13
LIMK1-202ENST00000418310 RUFY2Q8WXA3 655 aa14.26□□□□□ -0.13
LIMK1-202ENST00000418310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMK1-202ENST00000418310 A0A0D9SFI3 127 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 UQCRHLA0A096LP55 91 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 SASH1O94885 1247 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 UQCRHP07919 91 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 KSR2Q6VAB6 950 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 SPC24Q8NBT2 197 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 MYD88Q99836 296 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
LIMK1-202ENST00000418310 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 PXDNQ92626 1479 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 AOX1Q06278 1338 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 ATP5J2-PTCD1G3V325 749 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
LIMK1-202ENST00000418310 ZKSCAN1P17029 563 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-202ENST00000418310 TSC1Q92574 1164 aa14.25□□□□□ -0.13
LIMK1-202ENST00000418310 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
LIMK1-202ENST00000418310 GRM8O00222 908 aa14.24□□□□□ -0.13
LIMK1-202ENST00000418310 DNAJC2Q99543 621 aaKnown RBP14.24□□□□□ -0.13
LIMK1-202ENST00000418310 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
LIMK1-202ENST00000418310 FAM177BA6PVY3 158 aa14.24□□□□□ -0.13
LIMK1-202ENST00000418310 PHF14O94880 888 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 ADCY5O95622 1261 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CREB3L3Q68CJ9 461 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
LIMK1-202ENST00000418310 EPHA10Q5JZY3 1008 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CCDC183Q5T5S1 534 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 LARP1BQ659C4 914 aaKnown RBP14.23□□□□□ -0.13
LIMK1-202ENST00000418310 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms