RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 TTLL7Q6ZT98 887 aa22.58■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ZNF652Q9Y2D9 606 aa22.58■■□□□ 1.21
COMMD3-BMI1-201ENST00000417470 ZBED9Q6R2W3 1325 aa22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 ANXA1P04083 346 aa22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 KIF6Q6ZMV9 814 aa22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 COPS6Q7L5N1 327 aa22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 PPP1R1BQ9UD71 204 aaPredicted RBP22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 SCN7AQ01118 1682 aa22.57■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 NFIXQ14938 502 aa22.56■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 PARP3Q9Y6F1 533 aa22.56■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 XAGE3Q8WTP9 111 aa22.55■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 STK31Q9BXU1 1019 aa22.55■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 CT47B1P0C2W7 299 aaPredicted RBP22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 DDR1Q08345 913 aa22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 TBC1D9BQ66K14 1250 aa22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 GIGYF2Q6Y7W6 1299 aaKnown RBP22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 ZNF428Q96B54 188 aa22.54■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 HLFQ16534 295 aa22.53■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 SETDB2Q96T68 719 aa22.52■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 CD2APQ9Y5K6 639 aa22.52■■□□□ 1.2
COMMD3-BMI1-201ENST00000417470 ATP10DQ9P241 1426 aa22.51■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 AIMP1Q12904 312 aaKnown RBP22.51■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 ANKRD13DQ6ZTN6 518 aa22.51■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 PHAXQ9H814 394 aaKnown RBP22.51■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 SLC4A2P04920 1241 aa22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 SERPINB2P05120 415 aa22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 HSP90AB3PQ58FF7 597 aa22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 ZBTB3Q9H5J0 574 aa22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 ZNF34Q8IZ26 560 aa22.49■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 NIP7Q9Y221 180 aaKnown RBP eCLIP22.48■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 CACNA1FO60840 1977 aa22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 DDX58O95786 925 aaKnown RBP22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 TCIRG1Q13488 830 aa22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 NRXN2Q9P2S2 1712 aa22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 C10orf71Q711Q0 1435 aa22.47■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 NUP98P52948 1817 aa22.46■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 ALDH1L2Q3SY69 923 aa22.46■■□□□ 1.19
COMMD3-BMI1-201ENST00000417470 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PARP10Q53GL7 1025 aa22.45■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 TGFB2P61812 414 aa22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 FLIIQ13045 1269 aa22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 TRIM28Q13263 835 aaKnown RBP22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 KSR2Q6VAB6 950 aa22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 G2E3Q7L622 706 aa22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 RIC3Q7Z5B4 369 aa22.43■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 KIF13BQ9NQT8 1826 aa22.43■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 UBN2Q6ZU65 1347 aa22.42■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 BRPF1P55201 1214 aaPredicted RBP22.42■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 NBPF5PQ86XG9 351 aaPredicted RBP22.42■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 NYXQ9GZU5 481 aa22.42■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 AFDNP55196 1824 aaKnown RBP22.41■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PPP1R42Q7Z4L9 355 aa22.41■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 MRPL50Q8N5N7 158 aaKnown RBP22.41■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 CNBD1Q8NA66 436 aa22.41■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 METTL22Q9BUU2 404 aaPredicted RBP22.41■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PI4KAP2A4QPH2 592 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 SUSD4Q5VX71 490 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PI4KAP1Q8N8J0 262 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 PDZRN3Q9UPQ7 1066 aa22.4■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 ADCY9O60503 1353 aa22.39■■□□□ 1.18
COMMD3-BMI1-201ENST00000417470 GPTP24298 496 aa22.39■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 NLRP10Q86W26 655 aa22.39■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 KLHL34Q8N239 644 aa22.39■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 NTSR2O95665 410 aa22.38■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 ST5P78524 1137 aa22.38■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 FKBP5Q13451 457 aaPredicted RBP22.38■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 NLGN2Q8NFZ4 835 aa22.38■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 MAP3K2Q9Y2U5 619 aa22.38■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 KLRG2A4D1S0 409 aaPredicted RBP22.37■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 RARSP54136 660 aaKnown RBP22.37■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 UTP14AQ9BVJ6 771 aaKnown RBP22.37■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 ANKRD36CQ5JPF3 1778 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 PDE6BP35913 854 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 SLC10A5Q5PT55 438 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 CCDC191Q8NCU4 936 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 RIC1Q4ADV7 1423 aa22.36■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 ARFGEF2Q9Y6D5 1785 aa22.35■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 PXDNLA1KZ92 1463 aa22.35■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 PTPRCP08575 1304 aa22.35■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 NPHP1O15259 732 aa22.35■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 MYD88Q99836 296 aa22.35■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 ATP5J2-PTCD1G3V325 749 aa22.34■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 KCNA3P22001 575 aa22.34■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 GTF2E1P29083 439 aaPredicted RBP22.34■■□□□ 1.17
COMMD3-BMI1-201ENST00000417470 NEXNQ0ZGT2 675 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms