RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 RASSF7Q02833 373 aa9.82□□□□□ -0.84
CASP4-202ENST00000417440 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
CASP4-202ENST00000417440 SLC52A2Q9HAB3 445 aa9.82□□□□□ -0.84
CASP4-202ENST00000417440 C4AP0C0L4 1744 aa9.82□□□□□ -0.84
CASP4-202ENST00000417440 PLEKHG2Q9H7P9 1386 aa9.81□□□□□ -0.84
CASP4-202ENST00000417440 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
CASP4-202ENST00000417440 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
CASP4-202ENST00000417440 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
CASP4-202ENST00000417440 TM4SF1P30408 202 aa9.81□□□□□ -0.84
CASP4-202ENST00000417440 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
CASP4-202ENST00000417440 DNAJC5GQ8N7S2 189 aa9.81□□□□□ -0.84
CASP4-202ENST00000417440 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
CASP4-202ENST00000417440 NFIXQ14938 502 aa9.8□□□□□ -0.84
CASP4-202ENST00000417440 MTHFSDQ2M296 383 aaKnown RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 CC2D1BQ5T0F9 858 aaKnown RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 ZBTB1Q9Y2K1 713 aa9.8□□□□□ -0.84
CASP4-202ENST00000417440 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 KCPQ6ZWJ8 1503 aa9.8□□□□□ -0.84
CASP4-202ENST00000417440 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
CASP4-202ENST00000417440 CLSPNQ9HAW4 1339 aa9.8□□□□□ -0.84
CASP4-202ENST00000417440 SERPINB2P05120 415 aa9.79□□□□□ -0.84
CASP4-202ENST00000417440 C2CD5Q86YS7 1000 aa9.79□□□□□ -0.84
CASP4-202ENST00000417440 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
CASP4-202ENST00000417440 NARFQ9UHQ1 456 aa9.79□□□□□ -0.84
CASP4-202ENST00000417440 KIAA1551Q9HCM1 1747 aa9.79□□□□□ -0.84
CASP4-202ENST00000417440 IRX5P78411 483 aaPredicted RBP9.78□□□□□ -0.84
CASP4-202ENST00000417440 CCDC24Q8N4L8 307 aa9.78□□□□□ -0.84
CASP4-202ENST00000417440 COL5A3P25940 1745 aaPredicted RBP9.78□□□□□ -0.84
CASP4-202ENST00000417440 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
CASP4-202ENST00000417440 COL15A1P39059 1388 aa9.77□□□□□ -0.84
CASP4-202ENST00000417440 U2SURPO15042 1029 aaKnown RBP9.77□□□□□ -0.85
CASP4-202ENST00000417440 DIAPH1O60610 1272 aaKnown RBP9.77□□□□□ -0.85
CASP4-202ENST00000417440 FSTL1Q12841 308 aa9.77□□□□□ -0.85
CASP4-202ENST00000417440 TTC5Q8N0Z6 440 aa9.77□□□□□ -0.85
CASP4-202ENST00000417440 TTLL6Q8N841 843 aa9.77□□□□□ -0.85
CASP4-202ENST00000417440 ZNF622Q969S3 477 aaKnown RBP eCLIP9.77□□□□□ -0.85
CASP4-202ENST00000417440 OCEL1Q9H607 264 aa9.77□□□□□ -0.85
CASP4-202ENST00000417440 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
CASP4-202ENST00000417440 MYH14Q7Z406 1995 aaKnown RBP9.76□□□□□ -0.85
CASP4-202ENST00000417440 H0YIN7 160 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 NPHP1O15259 732 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
CASP4-202ENST00000417440 SMC1BQ8NDV3 1235 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 KLRG1Q96E93 195 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 ZNF831Q5JPB2 1677 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
CASP4-202ENST00000417440 STARD3NLO95772 234 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 LMNB1P20700 586 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 PRELPP51888 382 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 TEFQ10587 303 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 TBC1D9BQ66K14 1250 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 TJP1Q07157 1748 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
CASP4-202ENST00000417440 A0A087WZG4 1122 aa9.74□□□□□ -0.85
CASP4-202ENST00000417440 GLTPD2A6NH11 291 aa9.74□□□□□ -0.85
CASP4-202ENST00000417440 C21orf2O43822 256 aa9.74□□□□□ -0.85
CASP4-202ENST00000417440 VEGFAP15692 232 aaPredicted RBP9.74□□□□□ -0.85
CASP4-202ENST00000417440 COL13A1Q5TAT6 717 aaPredicted RBP9.74□□□□□ -0.85
CASP4-202ENST00000417440 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
CASP4-202ENST00000417440 ZNF496Q96IT1 587 aaPredicted RBP9.74□□□□□ -0.85
CASP4-202ENST00000417440 GNAT3A8MTJ3 354 aa9.73□□□□□ -0.85
CASP4-202ENST00000417440 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
CASP4-202ENST00000417440 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
CASP4-202ENST00000417440 IL17REQ8NFR9 667 aa9.73□□□□□ -0.85
CASP4-202ENST00000417440 NFKBIEO00221 500 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 A1BGP04217 495 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 PDE6BP35913 854 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 PIP4K2AP48426 406 aaPredicted RBP9.72□□□□□ -0.85
CASP4-202ENST00000417440 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 ZNF790Q6PG37 636 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 SLC39A7Q92504 469 aa9.72□□□□□ -0.85
CASP4-202ENST00000417440 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
CASP4-202ENST00000417440 KCNQ3O43525 872 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 C7P10643 843 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 PLCG2P16885 1265 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 JMYQ8N9B5 988 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 FMNL2Q96PY5 1086 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 BRIP1Q9BX63 1249 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.86
CASP4-202ENST00000417440 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 MRC1P22897 1456 aa9.71□□□□□ -0.86
CASP4-202ENST00000417440 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 ARFGEF1Q9Y6D6 1849 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 BRCA1P38398 1863 aaKnown RBP9.7□□□□□ -0.86
CASP4-202ENST00000417440 IL6STP40189 918 aaPredicted RBP9.7□□□□□ -0.86
CASP4-202ENST00000417440 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
CASP4-202ENST00000417440 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 CNBD1Q8NA66 436 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
CASP4-202ENST00000417440 HEG1Q9ULI3 1381 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 ADAMTS7Q9UKP4 1686 aa9.7□□□□□ -0.86
CASP4-202ENST00000417440 WDR90Q96KV7 1748 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms