RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
LINC00494-201ENST00000416742 DCAF5Q96JK2 942 aa12.08□□□□□ -0.47
LINC00494-201ENST00000416742 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.47
LINC00494-201ENST00000416742 MEGF6O75095 1541 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
LINC00494-201ENST00000416742 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 KIF1AQ12756 1690 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 SPATA31A3Q5VYP0 1347 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 PTMSP20962 102 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
LINC00494-201ENST00000416742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC00494-201ENST00000416742 SGSM2O43147 1006 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 ANAPC15P60006 121 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
LINC00494-201ENST00000416742 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
LINC00494-201ENST00000416742 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 MCM2P49736 904 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 SASH1O94885 1247 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 GCKRQ14397 625 aa12.06□□□□□ -0.48
LINC00494-201ENST00000416742 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
LINC00494-201ENST00000416742 METTL22Q9BUU2 404 aaPredicted RBP12.06□□□□□ -0.48
LINC00494-201ENST00000416742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.06□□□□□ -0.48
LINC00494-201ENST00000416742 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
LINC00494-201ENST00000416742 HSPA4P34932 840 aa12.05□□□□□ -0.48
LINC00494-201ENST00000416742 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
LINC00494-201ENST00000416742 BRINP3Q76B58 766 aa12.05□□□□□ -0.48
LINC00494-201ENST00000416742 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
LINC00494-201ENST00000416742 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
LINC00494-201ENST00000416742 BOLA2Q9H3K6 86 aa12.05□□□□□ -0.48
LINC00494-201ENST00000416742 STRN4Q9NRL3 753 aa12.05□□□□□ -0.48
LINC00494-201ENST00000416742 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
LINC00494-201ENST00000416742 CYP2E1P05181 493 aaPredicted RBP12.04□□□□□ -0.48
LINC00494-201ENST00000416742 MRE11P49959 708 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 FOXD4L6Q3SYB3 417 aaPredicted RBP12.04□□□□□ -0.48
LINC00494-201ENST00000416742 FOXD4L3Q6VB84 417 aaPredicted RBP12.04□□□□□ -0.48
LINC00494-201ENST00000416742 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 UBE3BQ7Z3V4 1068 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
LINC00494-201ENST00000416742 GAS2L3Q86XJ1 694 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 TLR7Q9NYK1 1049 aaKnown RBP12.04□□□□□ -0.48
LINC00494-201ENST00000416742 SNX14Q9Y5W7 946 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 RAD50Q92878 1312 aa12.04□□□□□ -0.48
LINC00494-201ENST00000416742 KCNJ4P48050 445 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
LINC00494-201ENST00000416742 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 A0A087WZG4 1122 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 CPA1P15085 419 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 UTYO14607 1347 aa12.03□□□□□ -0.48
LINC00494-201ENST00000416742 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
LINC00494-201ENST00000416742 USP42Q9H9J4 1324 aaKnown RBP12.03□□□□□ -0.48
LINC00494-201ENST00000416742 PTH1RQ03431 593 aa12.02□□□□□ -0.48
LINC00494-201ENST00000416742 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.48
LINC00494-201ENST00000416742 EVI5LQ96CN4 794 aa12.02□□□□□ -0.48
LINC00494-201ENST00000416742 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.48
LINC00494-201ENST00000416742 DCCP43146 1447 aa12.02□□□□□ -0.48
LINC00494-201ENST00000416742 STRCP1A6NGW2 1772 aa12.02□□□□□ -0.48
LINC00494-201ENST00000416742 EVA1CP58658 441 aa12.02□□□□□ -0.49
LINC00494-201ENST00000416742 KLHL40Q2TBA0 621 aa12.02□□□□□ -0.49
LINC00494-201ENST00000416742 CUL4AQ13619 759 aa12.02□□□□□ -0.49
LINC00494-201ENST00000416742 PRPF40BQ6NWY9 871 aaKnown RBP12.02□□□□□ -0.49
LINC00494-201ENST00000416742 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
LINC00494-201ENST00000416742 FSD1Q9BTV5 496 aa12.01□□□□□ -0.49
LINC00494-201ENST00000416742 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
LINC00494-201ENST00000416742 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
LINC00494-201ENST00000416742 CASTP20810 708 aaKnown RBP12.01□□□□□ -0.49
LINC00494-201ENST00000416742 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
LINC00494-201ENST00000416742 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
LINC00494-201ENST00000416742 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 A1BGP04217 495 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 DTNBO60941 627 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 AK2P54819 239 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 LRP10Q7Z4F1 713 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 EDC3Q96F86 508 aaKnown RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 INTS4Q96HW7 963 aaKnown RBP12□□□□□ -0.49
LINC00494-201ENST00000416742 WDR17Q8IZU2 1322 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
LINC00494-201ENST00000416742 TFCP2Q12800 502 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms