RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
MDC1-202ENST00000416571 POTECB2RU33 542 aa13.46□□□□□ -0.25
MDC1-202ENST00000416571 A1BGP04217 495 aa13.46□□□□□ -0.25
MDC1-202ENST00000416571 STYK1Q6J9G0 422 aa13.46□□□□□ -0.25
MDC1-202ENST00000416571 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
MDC1-202ENST00000416571 DZIP3Q86Y13 1208 aaKnown RBP13.46□□□□□ -0.25
MDC1-202ENST00000416571 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
MDC1-202ENST00000416571 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
MDC1-202ENST00000416571 IQCA1LA6NCM1 817 aa13.45□□□□□ -0.26
MDC1-202ENST00000416571 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
MDC1-202ENST00000416571 DDNO94850 711 aaPredicted RBP13.45□□□□□ -0.26
MDC1-202ENST00000416571 CAMTA2O94983 1202 aa13.45□□□□□ -0.26
MDC1-202ENST00000416571 SRGNP10124 158 aa13.45□□□□□ -0.26
MDC1-202ENST00000416571 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
MDC1-202ENST00000416571 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
MDC1-202ENST00000416571 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
MDC1-202ENST00000416571 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
MDC1-202ENST00000416571 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
MDC1-202ENST00000416571 SCN4AP35499 1836 aa13.43□□□□□ -0.26
MDC1-202ENST00000416571 CCDC93Q567U6 631 aa13.43□□□□□ -0.26
MDC1-202ENST00000416571 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
MDC1-202ENST00000416571 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
MDC1-202ENST00000416571 POTEIP0CG38 1075 aa13.42□□□□□ -0.26
MDC1-202ENST00000416571 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
MDC1-202ENST00000416571 PRKAR2BP31323 418 aa13.42□□□□□ -0.26
MDC1-202ENST00000416571 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
MDC1-202ENST00000416571 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
MDC1-202ENST00000416571 KCNQ3O43525 872 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 NPR1P16066 1061 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 CLEC4GQ6UXB4 293 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 TPTE2Q6XPS3 522 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 NUDCQ9Y266 331 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
MDC1-202ENST00000416571 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
MDC1-202ENST00000416571 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
MDC1-202ENST00000416571 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
MDC1-202ENST00000416571 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
MDC1-202ENST00000416571 PHACTR3Q96KR7 559 aa13.4□□□□□ -0.26
MDC1-202ENST00000416571 FAM177BA6PVY3 158 aa13.39□□□□□ -0.27
MDC1-202ENST00000416571 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
MDC1-202ENST00000416571 FKBP4Q02790 459 aaKnown RBP eCLIP13.39□□□□□ -0.27
MDC1-202ENST00000416571 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
MDC1-202ENST00000416571 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
MDC1-202ENST00000416571 TAF1DQ9H5J8 278 aaPredicted RBP13.39□□□□□ -0.27
MDC1-202ENST00000416571 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
MDC1-202ENST00000416571 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
MDC1-202ENST00000416571 CNTNAP1P78357 1384 aa13.39□□□□□ -0.27
MDC1-202ENST00000416571 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
MDC1-202ENST00000416571 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
MDC1-202ENST00000416571 RTKN2Q8IZC4 609 aa13.38□□□□□ -0.27
MDC1-202ENST00000416571 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
MDC1-202ENST00000416571 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
MDC1-202ENST00000416571 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
MDC1-202ENST00000416571 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
MDC1-202ENST00000416571 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
MDC1-202ENST00000416571 MCM10Q7L590 875 aa13.37□□□□□ -0.27
MDC1-202ENST00000416571 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
MDC1-202ENST00000416571 PASKQ96RG2 1323 aa13.37□□□□□ -0.27
MDC1-202ENST00000416571 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
MDC1-202ENST00000416571 LAMB4A4D0S4 1761 aa13.36□□□□□ -0.27
MDC1-202ENST00000416571 RGL2O15211 777 aa13.36□□□□□ -0.27
MDC1-202ENST00000416571 FOXN1O15353 648 aa13.36□□□□□ -0.27
MDC1-202ENST00000416571 EPHX2P34913 555 aa13.36□□□□□ -0.27
MDC1-202ENST00000416571 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
MDC1-202ENST00000416571 KLRG2A4D1S0 409 aaPredicted RBP13.35□□□□□ -0.27
MDC1-202ENST00000416571 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
MDC1-202ENST00000416571 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
MDC1-202ENST00000416571 RNF123Q5XPI4 1314 aa13.35□□□□□ -0.27
MDC1-202ENST00000416571 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 NEFMP07197 916 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 CTCFP49711 727 aaPredicted RBP13.34□□□□□ -0.27
MDC1-202ENST00000416571 VEGFBP49765 207 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
MDC1-202ENST00000416571 OLFM4Q6UX06 510 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 SYNE4Q8N205 404 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
MDC1-202ENST00000416571 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
MDC1-202ENST00000416571 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
MDC1-202ENST00000416571 ITGBL1O95965 494 aaPredicted RBP13.33□□□□□ -0.28
MDC1-202ENST00000416571 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
MDC1-202ENST00000416571 HLFQ16534 295 aa13.33□□□□□ -0.28
MDC1-202ENST00000416571 GPC2Q8N158 579 aa13.33□□□□□ -0.28
MDC1-202ENST00000416571 NGEFQ8N5V2 710 aa13.33□□□□□ -0.28
MDC1-202ENST00000416571 FZD9O00144 591 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
MDC1-202ENST00000416571 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
MDC1-202ENST00000416571 DEFB115Q30KQ5 88 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 MAP1SQ66K74 1059 aaPredicted RBP13.32□□□□□ -0.28
MDC1-202ENST00000416571 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 KIF6Q6ZMV9 814 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 CNTROBQ8N137 903 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
MDC1-202ENST00000416571 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
MDC1-202ENST00000416571 GJA3Q9Y6H8 435 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 NUP98P52948 1817 aa13.32□□□□□ -0.28
MDC1-202ENST00000416571 PSMD1Q99460 953 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms