RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
LINC00475-202ENST00000416438 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
LINC00475-202ENST00000416438 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
LINC00475-202ENST00000416438 MPNDQ8N594 471 aa17.73■□□□□ 0.43
LINC00475-202ENST00000416438 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
LINC00475-202ENST00000416438 NFAT5O94916 1531 aa17.73■□□□□ 0.43
LINC00475-202ENST00000416438 ZSCAN22P10073 491 aaPredicted RBP17.72■□□□□ 0.43
LINC00475-202ENST00000416438 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
LINC00475-202ENST00000416438 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 STX6O43752 255 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
LINC00475-202ENST00000416438 HSP90AA2PQ14568 343 aaPredicted RBP17.72■□□□□ 0.43
LINC00475-202ENST00000416438 C1orf141Q5JVX7 400 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 AACSQ86V21 672 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 SYAP1Q96A49 352 aaPredicted RBP17.72■□□□□ 0.43
LINC00475-202ENST00000416438 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 SMC3Q9UQE7 1217 aa17.72■□□□□ 0.43
LINC00475-202ENST00000416438 COL9A3Q14050 684 aaPredicted RBP17.71■□□□□ 0.43
LINC00475-202ENST00000416438 KSR2Q6VAB6 950 aa17.71■□□□□ 0.43
LINC00475-202ENST00000416438 HYPKQ9NX55 129 aa17.71■□□□□ 0.43
LINC00475-202ENST00000416438 ZKSCAN5Q9Y2L8 839 aa17.71■□□□□ 0.43
LINC00475-202ENST00000416438 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.43
LINC00475-202ENST00000416438 USP42Q9H9J4 1324 aaKnown RBP17.71■□□□□ 0.43
LINC00475-202ENST00000416438 MTX1Q13505 466 aa17.71■□□□□ 0.43
LINC00475-202ENST00000416438 KCNH5Q8NCM2 988 aa17.71■□□□□ 0.43
LINC00475-202ENST00000416438 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
LINC00475-202ENST00000416438 PXDNQ92626 1479 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 FIBPO43427 364 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 GCP02774 474 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 UBE2Q2Q8WVN8 375 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 KAZALD1Q96I82 304 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 ADGRL3Q9HAR2 1447 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 RGPD2P0DJD1 1756 aa17.7■□□□□ 0.42
LINC00475-202ENST00000416438 N4BP2Q86UW6 1770 aaPredicted RBP17.7■□□□□ 0.42
LINC00475-202ENST00000416438 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
LINC00475-202ENST00000416438 SIL1Q9H173 461 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.69■□□□□ 0.42
LINC00475-202ENST00000416438 ZNF500O60304 480 aaPredicted RBP17.69■□□□□ 0.42
LINC00475-202ENST00000416438 SASH1O94885 1247 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 F13A1P00488 732 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 GJB2P29033 226 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
LINC00475-202ENST00000416438 NECAB1Q8N987 351 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 KLHDC4Q8TBB5 520 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
LINC00475-202ENST00000416438 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
LINC00475-202ENST00000416438 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
LINC00475-202ENST00000416438 ALDH1L1O75891 902 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 TPM2P07951 284 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 RUFY2Q8WXA3 655 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 BICC1Q9H694 974 aaKnown RBP17.68■□□□□ 0.42
LINC00475-202ENST00000416438 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 AMOTQ4VCS5 1084 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 TCHHQ07283 1943 aa17.68■□□□□ 0.42
LINC00475-202ENST00000416438 PTMAP06454 111 aaKnown RBP17.67■□□□□ 0.42
LINC00475-202ENST00000416438 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 CCDC39Q9UFE4 941 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
LINC00475-202ENST00000416438 TMEM87AQ8NBN3 555 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
LINC00475-202ENST00000416438 GRM8O00222 908 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
LINC00475-202ENST00000416438 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 ME3Q16798 604 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 EVI5LQ96CN4 794 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 ZSWIM6Q9HCJ5 1215 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
LINC00475-202ENST00000416438 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 PHF14O94880 888 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 HCLS1P14317 486 aaPredicted RBP17.66■□□□□ 0.42
LINC00475-202ENST00000416438 KCNJ4P48050 445 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 USP25Q9UHP3 1055 aa17.66■□□□□ 0.42
LINC00475-202ENST00000416438 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00475-202ENST00000416438 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
LINC00475-202ENST00000416438 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 RRP9O43818 475 aaKnown RBP17.65■□□□□ 0.42
LINC00475-202ENST00000416438 MYL6BP14649 208 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 CREB3L3Q68CJ9 461 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
LINC00475-202ENST00000416438 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
LINC00475-202ENST00000416438 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
LINC00475-202ENST00000416438 UBE2HP62256 183 aa17.64■□□□□ 0.41
LINC00475-202ENST00000416438 PDIA6Q15084 440 aa17.64■□□□□ 0.41
LINC00475-202ENST00000416438 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms