RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 DDX19BQ9UMR2 479 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 TNNQ9UQP3 1299 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 SCN7AQ01118 1682 aa10.63□□□□□ -0.71
RBM39-208ENST00000416108 QSER1Q2KHR3 1735 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 PI4KAP2A4QPH2 592 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 F6X3S4 739 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 KCNQ4P56696 695 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
RBM39-208ENST00000416108 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 PI4KAP1Q8N8J0 262 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 PLBD2Q8NHP8 589 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 COL15A1P39059 1388 aa10.62□□□□□ -0.71
RBM39-208ENST00000416108 MYH3P11055 1940 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 GNPATO15228 680 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 RLBP1P12271 317 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 HSP90AB3PQ58FF7 597 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 INTS5Q6P9B9 1019 aaKnown RBP10.61□□□□□ -0.71
RBM39-208ENST00000416108 DZIP3Q86Y13 1208 aaKnown RBP10.61□□□□□ -0.71
RBM39-208ENST00000416108 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 EXOC6Q8TAG9 804 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 SRCIN1Q9C0H9 1055 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
RBM39-208ENST00000416108 ADCY9O60503 1353 aa10.61□□□□□ -0.71
RBM39-208ENST00000416108 ATP10DQ9P241 1426 aa10.6□□□□□ -0.71
RBM39-208ENST00000416108 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
RBM39-208ENST00000416108 EIF5P55010 431 aaKnown RBP10.6□□□□□ -0.71
RBM39-208ENST00000416108 AAMPQ13685 434 aa10.6□□□□□ -0.71
RBM39-208ENST00000416108 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
RBM39-208ENST00000416108 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
RBM39-208ENST00000416108 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 ALDH1L1O75891 902 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 TTLL7Q6ZT98 887 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 MYD88Q99836 296 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 METTL22Q9BUU2 404 aaPredicted RBP10.59□□□□□ -0.71
RBM39-208ENST00000416108 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
RBM39-208ENST00000416108 ADRA2BP18089 450 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
RBM39-208ENST00000416108 TRAPPC3LQ5T215 181 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 LINS1Q8NG48 757 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 TBC1D2BQ9UPU7 963 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 HDAC5Q9UQL6 1122 aa10.58□□□□□ -0.72
RBM39-208ENST00000416108 ERVV-1B6SEH8 477 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 ZPR1O75312 459 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 PHF14O94880 888 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 GNAI3P08754 354 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 RFC4P35249 363 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 EZH2Q15910 746 aaKnown RBP10.57□□□□□ -0.72
RBM39-208ENST00000416108 BEND3Q5T5X7 828 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 PPP4R2Q9NY27 417 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 STK32BQ9NY57 414 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 C9orf78Q9NZ63 289 aaPredicted RBP10.57□□□□□ -0.72
RBM39-208ENST00000416108 CASZ1Q86V15 1759 aa10.57□□□□□ -0.72
RBM39-208ENST00000416108 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
RBM39-208ENST00000416108 SSFA2P28290 1259 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 TCIRG1Q13488 830 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
RBM39-208ENST00000416108 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 CCDC136Q96JN2 1154 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 CAMKK2Q96RR4 588 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 LAMB2P55268 1798 aa10.56□□□□□ -0.72
RBM39-208ENST00000416108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
RBM39-208ENST00000416108 NEURL1BA8MQ27 555 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 ATP5J2-PTCD1G3V325 749 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 RGL2O15211 777 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 MSH5O43196 834 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 CWF19L2Q2TBE0 894 aaKnown RBP10.55□□□□□ -0.72
RBM39-208ENST00000416108 DEFB132Q7Z7B7 95 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 PROM2Q8N271 834 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 CWC25Q9NXE8 425 aaPredicted RBP10.55□□□□□ -0.72
RBM39-208ENST00000416108 NARFQ9UHQ1 456 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 COL24A1Q17RW2 1714 aa10.55□□□□□ -0.72
RBM39-208ENST00000416108 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
RBM39-208ENST00000416108 CAMTA2O94983 1202 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 GNAI2P04899 355 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 USPL1Q5W0Q7 1092 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 CLEC4GQ6UXB4 293 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 CCDC191Q8NCU4 936 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 MEIS3Q99687 375 aa10.54□□□□□ -0.72
RBM39-208ENST00000416108 IBTKQ9P2D0 1353 aaPredicted RBP10.53□□□□□ -0.72
RBM39-208ENST00000416108 GRM8O00222 908 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 IGKV5-2P06315 115 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 GPTP24298 496 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 GCKRQ14397 625 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 HLFQ16534 295 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 PARP10Q53GL7 1025 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 ARHGEF1Q92888 912 aaKnown RBP10.53□□□□□ -0.72
RBM39-208ENST00000416108 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 ISCA1Q9BUE6 129 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
RBM39-208ENST00000416108 NIP7Q9Y221 180 aaKnown RBP eCLIP10.53□□□□□ -0.72
RBM39-208ENST00000416108 USP42Q9H9J4 1324 aaKnown RBP10.53□□□□□ -0.72
RBM39-208ENST00000416108 ZNF827Q17R98 1081 aa10.52□□□□□ -0.73
RBM39-208ENST00000416108 PPP1R42Q7Z4L9 355 aa10.52□□□□□ -0.73
RBM39-208ENST00000416108 USP44Q9H0E7 712 aa10.52□□□□□ -0.73
RBM39-208ENST00000416108 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms