RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
CTHRC1-202ENST00000415886 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
CTHRC1-202ENST00000415886 GAS2L2Q8NHY3 880 aa17.77■□□□□ 0.44
CTHRC1-202ENST00000415886 CNKSR1Q969H4 720 aa17.77■□□□□ 0.44
CTHRC1-202ENST00000415886 FMNL2Q96PY5 1086 aa17.77■□□□□ 0.44
CTHRC1-202ENST00000415886 PCNTO95613 3336 aa17.76■□□□□ 0.43
CTHRC1-202ENST00000415886 KCNQ3O43525 872 aa17.76■□□□□ 0.43
CTHRC1-202ENST00000415886 SRGNP10124 158 aa17.76■□□□□ 0.43
CTHRC1-202ENST00000415886 PIP4K2AP48426 406 aaPredicted RBP17.76■□□□□ 0.43
CTHRC1-202ENST00000415886 ST5P78524 1137 aa17.76■□□□□ 0.43
CTHRC1-202ENST00000415886 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
CTHRC1-202ENST00000415886 DZIP3Q86Y13 1208 aaKnown RBP17.75■□□□□ 0.43
CTHRC1-202ENST00000415886 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
CTHRC1-202ENST00000415886 CEMIPQ8WUJ3 1361 aa17.75■□□□□ 0.43
CTHRC1-202ENST00000415886 BTBD11A6QL63 1104 aa17.73■□□□□ 0.43
CTHRC1-202ENST00000415886 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
CTHRC1-202ENST00000415886 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
CTHRC1-202ENST00000415886 PRAMEF22A3QJZ6 481 aa17.72■□□□□ 0.43
CTHRC1-202ENST00000415886 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
CTHRC1-202ENST00000415886 PASKQ96RG2 1323 aa17.72■□□□□ 0.43
CTHRC1-202ENST00000415886 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 FOXN1O15353 648 aa17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 LDHDQ86WU2 507 aa17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 C7orf43Q8WVR3 580 aa17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 L3MBTL3Q96JM7 780 aaPredicted RBP17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 TAF1DQ9H5J8 278 aaPredicted RBP17.71■□□□□ 0.43
CTHRC1-202ENST00000415886 SCN4AP35499 1836 aa17.7■□□□□ 0.42
CTHRC1-202ENST00000415886 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
CTHRC1-202ENST00000415886 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
CTHRC1-202ENST00000415886 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
CTHRC1-202ENST00000415886 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
CTHRC1-202ENST00000415886 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
CTHRC1-202ENST00000415886 NPC1L1Q9UHC9 1359 aa17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 NPR1P16066 1061 aa17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
CTHRC1-202ENST00000415886 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
CTHRC1-202ENST00000415886 ADAMTSL1Q8N6G6 1762 aa17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 TMEM88BA6NKF7 163 aa17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 FAM177BA6PVY3 158 aa17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 ITGBL1O95965 494 aaPredicted RBP17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 VEGFBP49765 207 aa17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 MCM10Q7L590 875 aa17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 NIP7Q9Y221 180 aaKnown RBP eCLIP17.66■□□□□ 0.42
CTHRC1-202ENST00000415886 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 HACL1Q9UJ83 578 aa17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
CTHRC1-202ENST00000415886 EPHX2P34913 555 aa17.64■□□□□ 0.41
CTHRC1-202ENST00000415886 TPTE2Q6XPS3 522 aa17.64■□□□□ 0.41
CTHRC1-202ENST00000415886 PRDM10Q9NQV6 1147 aa17.64■□□□□ 0.41
CTHRC1-202ENST00000415886 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
CTHRC1-202ENST00000415886 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
CTHRC1-202ENST00000415886 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
CTHRC1-202ENST00000415886 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
CTHRC1-202ENST00000415886 AIDAQ96BJ3 306 aa17.63■□□□□ 0.41
CTHRC1-202ENST00000415886 HLFQ16534 295 aa17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 MAP1SQ66K74 1059 aaPredicted RBP17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
CTHRC1-202ENST00000415886 FZD9O00144 591 aa17.61■□□□□ 0.41
CTHRC1-202ENST00000415886 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
CTHRC1-202ENST00000415886 RGL2O15211 777 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 LBX1P52954 281 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 CNTROBQ8N137 903 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 ABCC12Q96J65 1359 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 COL4A5P29400 1685 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 LAMB4A4D0S4 1761 aa17.6■□□□□ 0.41
CTHRC1-202ENST00000415886 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
CTHRC1-202ENST00000415886 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
CTHRC1-202ENST00000415886 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
CTHRC1-202ENST00000415886 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
CTHRC1-202ENST00000415886 GPC2Q8N158 579 aa17.58■□□□□ 0.4
CTHRC1-202ENST00000415886 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 PSMD1Q99460 953 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
CTHRC1-202ENST00000415886 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
CTHRC1-202ENST00000415886 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
CTHRC1-202ENST00000415886 ABT1Q9ULW3 272 aaKnown RBP17.56■□□□□ 0.4
CTHRC1-202ENST00000415886 GJA3Q9Y6H8 435 aa17.56■□□□□ 0.4
CTHRC1-202ENST00000415886 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms