RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 IGHDP01880 384 aa17.87■□□□□ 0.45
HMGA1P1-201ENST00000415560 MEIS3Q99687 375 aa17.87■□□□□ 0.45
HMGA1P1-201ENST00000415560 MYD88Q99836 296 aa17.87■□□□□ 0.45
HMGA1P1-201ENST00000415560 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
HMGA1P1-201ENST00000415560 HMMRO75330 724 aa17.86■□□□□ 0.45
HMGA1P1-201ENST00000415560 ARXQ96QS3 562 aa17.86■□□□□ 0.45
HMGA1P1-201ENST00000415560 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
HMGA1P1-201ENST00000415560 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
HMGA1P1-201ENST00000415560 CRKLP46109 303 aaKnown RBP17.85■□□□□ 0.45
HMGA1P1-201ENST00000415560 A0A087WZG4 1122 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 ANKRD44Q8N8A2 993 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 CCNL1Q9UK58 526 aaPredicted RBP17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
HMGA1P1-201ENST00000415560 ITPK1Q13572 414 aa17.83■□□□□ 0.44
HMGA1P1-201ENST00000415560 RC3H1Q5TC82 1133 aaKnown RBP17.83■□□□□ 0.44
HMGA1P1-201ENST00000415560 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
HMGA1P1-201ENST00000415560 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
HMGA1P1-201ENST00000415560 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 ERVV-1B6SEH8 477 aa17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
HMGA1P1-201ENST00000415560 LY75O60449 1722 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 CNTNAP4Q9C0A0 1308 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 GRM8O00222 908 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 TRIM37O94972 964 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 ATP8B2P98198 1209 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 GCKRQ14397 625 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
HMGA1P1-201ENST00000415560 SLC27A3Q5K4L6 730 aa17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
HMGA1P1-201ENST00000415560 UTYO14607 1347 aa17.79■□□□□ 0.44
HMGA1P1-201ENST00000415560 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
HMGA1P1-201ENST00000415560 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
HMGA1P1-201ENST00000415560 RREB1Q92766 1687 aa17.79■□□□□ 0.44
HMGA1P1-201ENST00000415560 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
HMGA1P1-201ENST00000415560 TRIM28Q13263 835 aaKnown RBP17.78■□□□□ 0.44
HMGA1P1-201ENST00000415560 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
HMGA1P1-201ENST00000415560 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
HMGA1P1-201ENST00000415560 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.44
HMGA1P1-201ENST00000415560 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
HMGA1P1-201ENST00000415560 DCTPP1Q9H773 170 aa17.77■□□□□ 0.44
HMGA1P1-201ENST00000415560 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.44
HMGA1P1-201ENST00000415560 PLSCR1O15162 318 aa17.76■□□□□ 0.43
HMGA1P1-201ENST00000415560 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
HMGA1P1-201ENST00000415560 RTCBQ9Y3I0 505 aaKnown RBP17.76■□□□□ 0.43
HMGA1P1-201ENST00000415560 MYH14Q7Z406 1995 aaKnown RBP17.76■□□□□ 0.43
HMGA1P1-201ENST00000415560 NUP98P52948 1817 aa17.75■□□□□ 0.43
HMGA1P1-201ENST00000415560 TAF1LQ8IZX4 1826 aa17.75■□□□□ 0.43
HMGA1P1-201ENST00000415560 RGL2O15211 777 aa17.75■□□□□ 0.43
HMGA1P1-201ENST00000415560 PDZRN3Q9UPQ7 1066 aa17.75■□□□□ 0.43
HMGA1P1-201ENST00000415560 H7C1W4 665 aa17.74■□□□□ 0.43
HMGA1P1-201ENST00000415560 APBA3O96018 575 aa17.74■□□□□ 0.43
HMGA1P1-201ENST00000415560 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
HMGA1P1-201ENST00000415560 AK7Q96M32 723 aa17.74■□□□□ 0.43
HMGA1P1-201ENST00000415560 COL15A1P39059 1388 aa17.74■□□□□ 0.43
HMGA1P1-201ENST00000415560 KCNQ4P56696 695 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 HLFQ16534 295 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 HSP90AB4PQ58FF6 505 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 PPP1R42Q7Z4L9 355 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
HMGA1P1-201ENST00000415560 GNPATO15228 680 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 NUCB1Q02818 461 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 MTX1Q13505 466 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 UBE3BQ7Z3V4 1068 aa17.72■□□□□ 0.43
HMGA1P1-201ENST00000415560 ZPR1O75312 459 aa17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 POLA2Q14181 598 aa17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 ZNF34Q8IZ26 560 aa17.71■□□□□ 0.43
HMGA1P1-201ENST00000415560 C4BP0C0L5 1744 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 ADRA2BP18089 450 aa17.7■□□□□ 0.42
HMGA1P1-201ENST00000415560 RGS3P49796 1198 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms