RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TNRC18O15417 2968 aaPredicted RBP18.41■□□□□ 0.54
RAPGEF1-204ENST00000414781 CCDC93Q567U6 631 aa18.4■□□□□ 0.54
RAPGEF1-204ENST00000414781 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
RAPGEF1-204ENST00000414781 CARD14Q9BXL6 1004 aa18.4■□□□□ 0.54
RAPGEF1-204ENST00000414781 DGKZQ13574 1117 aa18.39■□□□□ 0.53
RAPGEF1-204ENST00000414781 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
RAPGEF1-204ENST00000414781 MASTLQ96GX5 879 aa18.39■□□□□ 0.53
RAPGEF1-204ENST00000414781 TSKSQ9UJT2 592 aa18.39■□□□□ 0.53
RAPGEF1-204ENST00000414781 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 SRGNP10124 158 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 GRM1Q13255 1194 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 GPC2Q8N158 579 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
RAPGEF1-204ENST00000414781 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
RAPGEF1-204ENST00000414781 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
RAPGEF1-204ENST00000414781 TLL2Q9Y6L7 1015 aa18.37■□□□□ 0.53
RAPGEF1-204ENST00000414781 ANKRD31Q8N7Z5 1873 aa18.37■□□□□ 0.53
RAPGEF1-204ENST00000414781 NPHP1O15259 732 aa18.36■□□□□ 0.53
RAPGEF1-204ENST00000414781 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
RAPGEF1-204ENST00000414781 ST5P78524 1137 aa18.36■□□□□ 0.53
RAPGEF1-204ENST00000414781 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
RAPGEF1-204ENST00000414781 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
RAPGEF1-204ENST00000414781 FZD9O00144 591 aa18.35■□□□□ 0.53
RAPGEF1-204ENST00000414781 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
RAPGEF1-204ENST00000414781 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
RAPGEF1-204ENST00000414781 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
RAPGEF1-204ENST00000414781 LMOD1P29536 600 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF1-204ENST00000414781 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
RAPGEF1-204ENST00000414781 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF1-204ENST00000414781 STARD3NLO95772 234 aa18.33■□□□□ 0.52
RAPGEF1-204ENST00000414781 HHIPL1Q96JK4 782 aa18.33■□□□□ 0.52
RAPGEF1-204ENST00000414781 SLX4Q8IY92 1834 aa18.33■□□□□ 0.52
RAPGEF1-204ENST00000414781 ARFGEF2Q9Y6D5 1785 aa18.32■□□□□ 0.52
RAPGEF1-204ENST00000414781 AOC2O75106 756 aa18.32■□□□□ 0.52
RAPGEF1-204ENST00000414781 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
RAPGEF1-204ENST00000414781 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
RAPGEF1-204ENST00000414781 MRC1P22897 1456 aa18.32■□□□□ 0.52
RAPGEF1-204ENST00000414781 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
RAPGEF1-204ENST00000414781 CST9Q5W186 159 aa18.31■□□□□ 0.52
RAPGEF1-204ENST00000414781 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
RAPGEF1-204ENST00000414781 JDP2Q8WYK2 163 aa18.3■□□□□ 0.52
RAPGEF1-204ENST00000414781 SCN7AQ01118 1682 aa18.3■□□□□ 0.52
RAPGEF1-204ENST00000414781 NPR1P16066 1061 aa18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 SOX10P56693 466 aa18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 SLC39A6Q13433 755 aa18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 USP50Q70EL3 339 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 AEBP1Q8IUX7 1158 aa18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
RAPGEF1-204ENST00000414781 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
RAPGEF1-204ENST00000414781 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
RAPGEF1-204ENST00000414781 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
RAPGEF1-204ENST00000414781 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
RAPGEF1-204ENST00000414781 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
RAPGEF1-204ENST00000414781 TRAF5O00463 557 aa18.26■□□□□ 0.51
RAPGEF1-204ENST00000414781 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF1-204ENST00000414781 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
RAPGEF1-204ENST00000414781 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
RAPGEF1-204ENST00000414781 NOGQ13253 232 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 CIAPIN1Q6FI81 312 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 PSMD1Q99460 953 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
RAPGEF1-204ENST00000414781 CASP8AP2Q9UKL3 1982 aa18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 KLRG2A4D1S0 409 aaPredicted RBP18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 SCNN1DP51172 638 aa18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 LGR6Q9HBX8 967 aa18.24■□□□□ 0.51
RAPGEF1-204ENST00000414781 CELF2O95319 508 aaKnown RBP18.23■□□□□ 0.51
RAPGEF1-204ENST00000414781 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF1-204ENST00000414781 NBPF15Q8N660 670 aa18.23■□□□□ 0.51
RAPGEF1-204ENST00000414781 SAGE1Q9NXZ1 904 aa18.23■□□□□ 0.51
RAPGEF1-204ENST00000414781 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF1-204ENST00000414781 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 ALDH1B1P30837 517 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 EPS15P42566 896 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
RAPGEF1-204ENST00000414781 CACNA1SQ13698 1873 aa18.21■□□□□ 0.51
RAPGEF1-204ENST00000414781 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
RAPGEF1-204ENST00000414781 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
RAPGEF1-204ENST00000414781 OLFM4Q6UX06 510 aa18.2■□□□□ 0.5
RAPGEF1-204ENST00000414781 ADARB2Q9NS39 739 aaKnown RBP18.2■□□□□ 0.5
RAPGEF1-204ENST00000414781 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
RAPGEF1-204ENST00000414781 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
RAPGEF1-204ENST00000414781 UBR2Q8IWV8 1755 aa18.18■□□□□ 0.5
RAPGEF1-204ENST00000414781 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
RAPGEF1-204ENST00000414781 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
RAPGEF1-204ENST00000414781 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
RAPGEF1-204ENST00000414781 SNED1Q8TER0 1413 aa18.17■□□□□ 0.5
RAPGEF1-204ENST00000414781 CTU1Q7Z7A3 348 aaKnown RBP18.16■□□□□ 0.5
RAPGEF1-204ENST00000414781 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
RAPGEF1-204ENST00000414781 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
RAPGEF1-204ENST00000414781 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
RAPGEF1-204ENST00000414781 RGL2O15211 777 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms