RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
SHMT2-202ENST00000414700 NUP188Q5SRE5 1749 aa19.6■□□□□ 0.73
SHMT2-202ENST00000414700 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
SHMT2-202ENST00000414700 APBA3O96018 575 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 SMIM5Q71RC9 77 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 PROM2Q8N271 834 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 BEND3Q5T5X7 828 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 ZBTB3Q9H5J0 574 aa19.59■□□□□ 0.73
SHMT2-202ENST00000414700 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.73
SHMT2-202ENST00000414700 ARXQ96QS3 562 aa19.58■□□□□ 0.73
SHMT2-202ENST00000414700 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.73
SHMT2-202ENST00000414700 IL6STP40189 918 aaPredicted RBP19.58■□□□□ 0.72
SHMT2-202ENST00000414700 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.72
SHMT2-202ENST00000414700 CWF19L2Q2TBE0 894 aaKnown RBP19.58■□□□□ 0.72
SHMT2-202ENST00000414700 MEIS3Q99687 375 aa19.58■□□□□ 0.72
SHMT2-202ENST00000414700 AMIGO3Q86WK7 504 aa19.57■□□□□ 0.72
SHMT2-202ENST00000414700 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
SHMT2-202ENST00000414700 C4BP0C0L5 1744 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 NBR1Q14596 966 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 TBC1D2BQ9UPU7 963 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 CNTNAP4Q9C0A0 1308 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 TXNRD1Q16881 649 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 SRCIN1Q9C0H9 1055 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
SHMT2-202ENST00000414700 IGKV5-2P06315 115 aa19.55■□□□□ 0.72
SHMT2-202ENST00000414700 MYD88Q99836 296 aa19.55■□□□□ 0.72
SHMT2-202ENST00000414700 METTL22Q9BUU2 404 aaPredicted RBP19.55■□□□□ 0.72
SHMT2-202ENST00000414700 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
SHMT2-202ENST00000414700 PLSCR1O15162 318 aa19.54■□□□□ 0.72
SHMT2-202ENST00000414700 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
SHMT2-202ENST00000414700 AFDNP55196 1824 aaKnown RBP19.54■□□□□ 0.72
SHMT2-202ENST00000414700 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
SHMT2-202ENST00000414700 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
SHMT2-202ENST00000414700 HLFQ16534 295 aa19.53■□□□□ 0.72
SHMT2-202ENST00000414700 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
SHMT2-202ENST00000414700 NUP98P52948 1817 aa19.53■□□□□ 0.72
SHMT2-202ENST00000414700 COL15A1P39059 1388 aa19.53■□□□□ 0.72
SHMT2-202ENST00000414700 MAP3K15Q6ZN16 1313 aa19.53■□□□□ 0.72
SHMT2-202ENST00000414700 GNPATO15228 680 aa19.52■□□□□ 0.72
SHMT2-202ENST00000414700 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.72
SHMT2-202ENST00000414700 KIF6Q6ZMV9 814 aa19.52■□□□□ 0.72
SHMT2-202ENST00000414700 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
SHMT2-202ENST00000414700 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
SHMT2-202ENST00000414700 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
SHMT2-202ENST00000414700 NEURL1BA8MQ27 555 aa19.51■□□□□ 0.71
SHMT2-202ENST00000414700 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
SHMT2-202ENST00000414700 NPM2Q86SE8 214 aaKnown RBP19.51■□□□□ 0.71
SHMT2-202ENST00000414700 NEXNQ0ZGT2 675 aa19.51■□□□□ 0.71
SHMT2-202ENST00000414700 RTL5Q5HYW3 569 aaPredicted RBP19.51■□□□□ 0.71
SHMT2-202ENST00000414700 UBR3Q6ZT12 1888 aa19.5■□□□□ 0.71
SHMT2-202ENST00000414700 RPS6KA4O75676 772 aa19.5■□□□□ 0.71
SHMT2-202ENST00000414700 EN1Q05925 392 aaPredicted RBP19.49■□□□□ 0.71
SHMT2-202ENST00000414700 ALDH1L1O75891 902 aa19.49■□□□□ 0.71
SHMT2-202ENST00000414700 IGHDP01880 384 aa19.49■□□□□ 0.71
SHMT2-202ENST00000414700 AAMPQ13685 434 aa19.49■□□□□ 0.71
SHMT2-202ENST00000414700 GIGYF2Q6Y7W6 1299 aaKnown RBP19.49■□□□□ 0.71
SHMT2-202ENST00000414700 RGPD3A6NKT7 1758 aaPredicted RBP19.48■□□□□ 0.71
SHMT2-202ENST00000414700 RGPD4Q7Z3J3 1758 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 GCKRQ14397 625 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 AK7Q96M32 723 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
SHMT2-202ENST00000414700 ANKRD36CQ5JPF3 1778 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
SHMT2-202ENST00000414700 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
SHMT2-202ENST00000414700 PHF14O94880 888 aa19.47■□□□□ 0.71
SHMT2-202ENST00000414700 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
SHMT2-202ENST00000414700 TCIRG1Q13488 830 aa19.47■□□□□ 0.71
SHMT2-202ENST00000414700 EZH2Q15910 746 aaKnown RBP19.47■□□□□ 0.71
SHMT2-202ENST00000414700 JARID2Q92833 1246 aaPredicted RBP19.47■□□□□ 0.71
SHMT2-202ENST00000414700 IPO9Q96P70 1041 aaKnown RBP19.47■□□□□ 0.71
SHMT2-202ENST00000414700 CHMP4BQ9H444 224 aaKnown RBP19.47■□□□□ 0.71
SHMT2-202ENST00000414700 ERVV-1B6SEH8 477 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 GPTP24298 496 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 DEFB132Q7Z7B7 95 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 CAMKK2Q96RR4 588 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
SHMT2-202ENST00000414700 GRM8O00222 908 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
SHMT2-202ENST00000414700 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
SHMT2-202ENST00000414700 ISCA1Q9BUE6 129 aa19.46■□□□□ 0.71
SHMT2-202ENST00000414700 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
SHMT2-202ENST00000414700 LRRFIP2Q9Y608 721 aaKnown RBP19.46■□□□□ 0.71
SHMT2-202ENST00000414700 GNAI3P08754 354 aa19.45■□□□□ 0.7
SHMT2-202ENST00000414700 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
SHMT2-202ENST00000414700 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
SHMT2-202ENST00000414700 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
SHMT2-202ENST00000414700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
SHMT2-202ENST00000414700 GNAI2P04899 355 aa19.44■□□□□ 0.7
SHMT2-202ENST00000414700 UBN2Q6ZU65 1347 aa19.44■□□□□ 0.7
SHMT2-202ENST00000414700 KDM2BQ8NHM5 1336 aa19.44■□□□□ 0.7
SHMT2-202ENST00000414700 A0A087WZG4 1122 aa19.43■□□□□ 0.7
SHMT2-202ENST00000414700 CEP85Q6P2H3 762 aa19.43■□□□□ 0.7
SHMT2-202ENST00000414700 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
SHMT2-202ENST00000414700 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
SHMT2-202ENST00000414700 UTYO14607 1347 aa19.43■□□□□ 0.7
SHMT2-202ENST00000414700 USPL1Q5W0Q7 1092 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms