RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZNF652Q9Y2D9 606 aa21.22■□□□□ 0.99
LINC00398-201ENST00000414407 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
LINC00398-201ENST00000414407 ANXA1P04083 346 aa21.21■□□□□ 0.99
LINC00398-201ENST00000414407 PPP1R1BQ9UD71 204 aaPredicted RBP21.21■□□□□ 0.99
LINC00398-201ENST00000414407 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
LINC00398-201ENST00000414407 TTLL7Q6ZT98 887 aa21.2■□□□□ 0.98
LINC00398-201ENST00000414407 COPS6Q7L5N1 327 aa21.2■□□□□ 0.98
LINC00398-201ENST00000414407 STK31Q9BXU1 1019 aa21.2■□□□□ 0.98
LINC00398-201ENST00000414407 SRCAPQ6ZRS2 3230 aa21.2■□□□□ 0.98
LINC00398-201ENST00000414407 BCORQ6W2J9 1755 aa21.19■□□□□ 0.98
LINC00398-201ENST00000414407 XAGE3Q8WTP9 111 aa21.19■□□□□ 0.98
LINC00398-201ENST00000414407 NFIXQ14938 502 aa21.18■□□□□ 0.98
LINC00398-201ENST00000414407 ZNF428Q96B54 188 aa21.18■□□□□ 0.98
LINC00398-201ENST00000414407 PARP3Q9Y6F1 533 aa21.18■□□□□ 0.98
LINC00398-201ENST00000414407 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
LINC00398-201ENST00000414407 CT47B1P0C2W7 299 aaPredicted RBP21.17■□□□□ 0.98
LINC00398-201ENST00000414407 TBC1D9BQ66K14 1250 aa21.17■□□□□ 0.98
LINC00398-201ENST00000414407 GIGYF2Q6Y7W6 1299 aaKnown RBP21.17■□□□□ 0.98
LINC00398-201ENST00000414407 DDR1Q08345 913 aa21.16■□□□□ 0.98
LINC00398-201ENST00000414407 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
LINC00398-201ENST00000414407 HLFQ16534 295 aa21.16■□□□□ 0.98
LINC00398-201ENST00000414407 SLC4A2P04920 1241 aa21.15■□□□□ 0.98
LINC00398-201ENST00000414407 ANKRD13DQ6ZTN6 518 aa21.15■□□□□ 0.98
LINC00398-201ENST00000414407 PLBD2Q8NHP8 589 aa21.15■□□□□ 0.98
LINC00398-201ENST00000414407 SETDB2Q96T68 719 aa21.15■□□□□ 0.98
LINC00398-201ENST00000414407 ZBTB3Q9H5J0 574 aa21.15■□□□□ 0.98
LINC00398-201ENST00000414407 PHAXQ9H814 394 aaKnown RBP21.15■□□□□ 0.98
LINC00398-201ENST00000414407 ATP10DQ9P241 1426 aa21.14■□□□□ 0.98
LINC00398-201ENST00000414407 CARMIL3Q8ND23 1372 aa21.14■□□□□ 0.98
LINC00398-201ENST00000414407 CD2APQ9Y5K6 639 aa21.14■□□□□ 0.97
LINC00398-201ENST00000414407 HSP90AB3PQ58FF7 597 aa21.13■□□□□ 0.97
LINC00398-201ENST00000414407 DDX58O95786 925 aaKnown RBP21.12■□□□□ 0.97
LINC00398-201ENST00000414407 SERPINB2P05120 415 aa21.12■□□□□ 0.97
LINC00398-201ENST00000414407 BICDL1Q6ZP65 573 aa21.12■□□□□ 0.97
LINC00398-201ENST00000414407 FHDC1Q9C0D6 1143 aaPredicted RBP21.12■□□□□ 0.97
LINC00398-201ENST00000414407 NIP7Q9Y221 180 aaKnown RBP eCLIP21.12■□□□□ 0.97
LINC00398-201ENST00000414407 CACNA1FO60840 1977 aa21.11■□□□□ 0.97
LINC00398-201ENST00000414407 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
LINC00398-201ENST00000414407 ZNF34Q8IZ26 560 aa21.11■□□□□ 0.97
LINC00398-201ENST00000414407 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
LINC00398-201ENST00000414407 ALDH1L2Q3SY69 923 aa21.1■□□□□ 0.97
LINC00398-201ENST00000414407 SYT17Q9BSW7 474 aa21.1■□□□□ 0.97
LINC00398-201ENST00000414407 NUP98P52948 1817 aa21.1■□□□□ 0.97
LINC00398-201ENST00000414407 NRXN2Q9P2S2 1712 aa21.09■□□□□ 0.97
LINC00398-201ENST00000414407 FLIIQ13045 1269 aa21.09■□□□□ 0.97
LINC00398-201ENST00000414407 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
LINC00398-201ENST00000414407 C10orf71Q711Q0 1435 aa21.09■□□□□ 0.97
LINC00398-201ENST00000414407 KSR2Q6VAB6 950 aa21.08■□□□□ 0.97
LINC00398-201ENST00000414407 G2E3Q7L622 706 aa21.08■□□□□ 0.97
LINC00398-201ENST00000414407 RIC3Q7Z5B4 369 aa21.08■□□□□ 0.97
LINC00398-201ENST00000414407 IBTKQ9P2D0 1353 aaPredicted RBP21.08■□□□□ 0.96
LINC00398-201ENST00000414407 TPTE2Q6XPS3 522 aa21.07■□□□□ 0.96
LINC00398-201ENST00000414407 NBPF5PQ86XG9 351 aaPredicted RBP21.07■□□□□ 0.96
LINC00398-201ENST00000414407 TGFB2P61812 414 aa21.06■□□□□ 0.96
LINC00398-201ENST00000414407 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
LINC00398-201ENST00000414407 CNBD1Q8NA66 436 aa21.06■□□□□ 0.96
LINC00398-201ENST00000414407 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
LINC00398-201ENST00000414407 UBN2Q6ZU65 1347 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 PI4KAP2A4QPH2 592 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 PRR5LQ6MZQ0 368 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 PPP1R42Q7Z4L9 355 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 MRPL50Q8N5N7 158 aaKnown RBP21.05■□□□□ 0.96
LINC00398-201ENST00000414407 PI4KAP1Q8N8J0 262 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 ISCA1Q9BUE6 129 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 METTL22Q9BUU2 404 aaPredicted RBP21.05■□□□□ 0.96
LINC00398-201ENST00000414407 KIF13BQ9NQT8 1826 aa21.05■□□□□ 0.96
LINC00398-201ENST00000414407 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
LINC00398-201ENST00000414407 GPTP24298 496 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 BRPF1P55201 1214 aaPredicted RBP21.04■□□□□ 0.96
LINC00398-201ENST00000414407 ST5P78524 1137 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 FKBP5Q13451 457 aaPredicted RBP21.04■□□□□ 0.96
LINC00398-201ENST00000414407 BRIP1Q9BX63 1249 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 MAP3K2Q9Y2U5 619 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 ADCY9O60503 1353 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
LINC00398-201ENST00000414407 NPHP1O15259 732 aa21.03■□□□□ 0.96
LINC00398-201ENST00000414407 SUSD4Q5VX71 490 aa21.03■□□□□ 0.96
LINC00398-201ENST00000414407 NLRP10Q86W26 655 aa21.03■□□□□ 0.96
LINC00398-201ENST00000414407 ANKRD36CQ5JPF3 1778 aa21.02■□□□□ 0.96
LINC00398-201ENST00000414407 ARFGEF2Q9Y6D5 1785 aa21.02■□□□□ 0.96
LINC00398-201ENST00000414407 RARSP54136 660 aaKnown RBP21.02■□□□□ 0.96
LINC00398-201ENST00000414407 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
LINC00398-201ENST00000414407 PDZRN3Q9UPQ7 1066 aa21.02■□□□□ 0.96
LINC00398-201ENST00000414407 PTPRCP08575 1304 aa21.02■□□□□ 0.95
LINC00398-201ENST00000414407 NTSR2O95665 410 aa21.01■□□□□ 0.95
LINC00398-201ENST00000414407 GTF2E1P29083 439 aaPredicted RBP21.01■□□□□ 0.95
LINC00398-201ENST00000414407 NEXNQ0ZGT2 675 aa21.01■□□□□ 0.95
LINC00398-201ENST00000414407 NLGN2Q8NFZ4 835 aa21.01■□□□□ 0.95
LINC00398-201ENST00000414407 DNAAF4Q8WXU2 420 aa21.01■□□□□ 0.95
LINC00398-201ENST00000414407 SMC4Q9NTJ3 1288 aa21.01■□□□□ 0.95
LINC00398-201ENST00000414407 PDE6BP35913 854 aa21■□□□□ 0.95
LINC00398-201ENST00000414407 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
LINC00398-201ENST00000414407 MYD88Q99836 296 aa21■□□□□ 0.95
LINC00398-201ENST00000414407 RIC1Q4ADV7 1423 aa20.99■□□□□ 0.95
LINC00398-201ENST00000414407 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
LINC00398-201ENST00000414407 ATP5J2-PTCD1G3V325 749 aa20.99■□□□□ 0.95
LINC00398-201ENST00000414407 PXDNLA1KZ92 1463 aa20.99■□□□□ 0.95
LINC00398-201ENST00000414407 SLC10A5Q5PT55 438 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms