RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
LINC00111-201ENST00000413718 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
LINC00111-201ENST00000413718 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
LINC00111-201ENST00000413718 THSD7BQ9C0I4 1608 aa12.75□□□□□ -0.37
LINC00111-201ENST00000413718 MKRN1Q9UHC7 482 aaKnown RBP12.75□□□□□ -0.37
LINC00111-201ENST00000413718 ZNF541Q9H0D2 1346 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
LINC00111-201ENST00000413718 FOXN1O15353 648 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 KCNQ3O43525 872 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 A1BGP04217 495 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 LDHDQ86WU2 507 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
LINC00111-201ENST00000413718 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
LINC00111-201ENST00000413718 TAF1DQ9H5J8 278 aaPredicted RBP12.74□□□□□ -0.37
LINC00111-201ENST00000413718 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
LINC00111-201ENST00000413718 SOGA3Q5TF21 947 aa12.73□□□□□ -0.37
LINC00111-201ENST00000413718 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
LINC00111-201ENST00000413718 COL4A5P29400 1685 aa12.73□□□□□ -0.37
LINC00111-201ENST00000413718 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
LINC00111-201ENST00000413718 ST5P78524 1137 aa12.72□□□□□ -0.37
LINC00111-201ENST00000413718 TEFQ10587 303 aa12.72□□□□□ -0.37
LINC00111-201ENST00000413718 DZIP3Q86Y13 1208 aaKnown RBP12.72□□□□□ -0.37
LINC00111-201ENST00000413718 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
LINC00111-201ENST00000413718 PRDM10Q9NQV6 1147 aa12.72□□□□□ -0.37
LINC00111-201ENST00000413718 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
LINC00111-201ENST00000413718 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
LINC00111-201ENST00000413718 IQCA1LA6NCM1 817 aa12.71□□□□□ -0.37
LINC00111-201ENST00000413718 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
LINC00111-201ENST00000413718 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
LINC00111-201ENST00000413718 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
LINC00111-201ENST00000413718 RGL2O15211 777 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
LINC00111-201ENST00000413718 VEGFBP49765 207 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00111-201ENST00000413718 OLFM4Q6UX06 510 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 USP16Q9Y5T5 823 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 LAMB4A4D0S4 1761 aa12.7□□□□□ -0.38
LINC00111-201ENST00000413718 ABCC12Q96J65 1359 aa12.69□□□□□ -0.38
LINC00111-201ENST00000413718 NBPF26B4DH59 902 aa12.69□□□□□ -0.38
LINC00111-201ENST00000413718 NPR1P16066 1061 aa12.69□□□□□ -0.38
LINC00111-201ENST00000413718 NBPF10Q6P3W6 841 aaKnown RBP12.69□□□□□ -0.38
LINC00111-201ENST00000413718 NBPF15Q8N660 670 aa12.69□□□□□ -0.38
LINC00111-201ENST00000413718 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
LINC00111-201ENST00000413718 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
LINC00111-201ENST00000413718 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
LINC00111-201ENST00000413718 TMEM88BA6NKF7 163 aa12.68□□□□□ -0.38
LINC00111-201ENST00000413718 FZD9O00144 591 aa12.68□□□□□ -0.38
LINC00111-201ENST00000413718 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
LINC00111-201ENST00000413718 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
LINC00111-201ENST00000413718 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
LINC00111-201ENST00000413718 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
LINC00111-201ENST00000413718 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
LINC00111-201ENST00000413718 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
LINC00111-201ENST00000413718 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
LINC00111-201ENST00000413718 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
LINC00111-201ENST00000413718 HSPA8P11142 646 aaKnown RBP12.66□□□□□ -0.38
LINC00111-201ENST00000413718 EPHX2P34913 555 aa12.66□□□□□ -0.38
LINC00111-201ENST00000413718 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
LINC00111-201ENST00000413718 NPHP1O15259 732 aa12.65□□□□□ -0.38
LINC00111-201ENST00000413718 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
LINC00111-201ENST00000413718 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
LINC00111-201ENST00000413718 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
LINC00111-201ENST00000413718 PSMD1Q99460 953 aa12.65□□□□□ -0.38
LINC00111-201ENST00000413718 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
LINC00111-201ENST00000413718 IBTKQ9P2D0 1353 aaPredicted RBP12.65□□□□□ -0.38
LINC00111-201ENST00000413718 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
LINC00111-201ENST00000413718 HLFQ16534 295 aa12.64□□□□□ -0.39
LINC00111-201ENST00000413718 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
LINC00111-201ENST00000413718 MAP1SQ66K74 1059 aaPredicted RBP12.64□□□□□ -0.39
LINC00111-201ENST00000413718 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
LINC00111-201ENST00000413718 GPC2Q8N158 579 aa12.64□□□□□ -0.39
LINC00111-201ENST00000413718 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00111-201ENST00000413718 LBX1P52954 281 aa12.63□□□□□ -0.39
LINC00111-201ENST00000413718 MCM10Q7L590 875 aa12.63□□□□□ -0.39
LINC00111-201ENST00000413718 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
LINC00111-201ENST00000413718 PNMA8AQ86V59 439 aaPredicted RBP12.63□□□□□ -0.39
LINC00111-201ENST00000413718 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
LINC00111-201ENST00000413718 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
LINC00111-201ENST00000413718 AIDAQ96BJ3 306 aa12.63□□□□□ -0.39
LINC00111-201ENST00000413718 SLC34A2O95436 690 aa12.62□□□□□ -0.39
LINC00111-201ENST00000413718 SCNN1DP51172 638 aa12.62□□□□□ -0.39
LINC00111-201ENST00000413718 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
LINC00111-201ENST00000413718 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
LINC00111-201ENST00000413718 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
LINC00111-201ENST00000413718 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00111-201ENST00000413718 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
LINC00111-201ENST00000413718 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
LINC00111-201ENST00000413718 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00111-201ENST00000413718 DEFB115Q30KQ5 88 aa12.6□□□□□ -0.39
LINC00111-201ENST00000413718 ABHD8Q96I13 439 aa12.6□□□□□ -0.39
LINC00111-201ENST00000413718 NUP98P52948 1817 aa12.6□□□□□ -0.39
LINC00111-201ENST00000413718 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
LINC00111-201ENST00000413718 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
LINC00111-201ENST00000413718 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
LINC00111-201ENST00000413718 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
LINC00111-201ENST00000413718 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms