RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CARMIL3Q8ND23 1372 aa13.08□□□□□ -0.31
TMEM248-202ENST00000413593 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.32
TMEM248-202ENST00000413593 ANXA1P04083 346 aa13.08□□□□□ -0.32
TMEM248-202ENST00000413593 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.322e-9■□□□□ 9.6
TMEM248-202ENST00000413593 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
TMEM248-202ENST00000413593 HDGFL1Q5TGJ6 251 aa13.08□□□□□ -0.32
TMEM248-202ENST00000413593 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
TMEM248-202ENST00000413593 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
TMEM248-202ENST00000413593 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
TMEM248-202ENST00000413593 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
TMEM248-202ENST00000413593 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 DPEP1P16444 411 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 HLFQ16534 295 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 DIEXFQ68CQ4 756 aaKnown RBP13.07□□□□□ -0.32
TMEM248-202ENST00000413593 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 TSR2Q969E8 191 aaKnown RBP13.07□□□□□ -0.32
TMEM248-202ENST00000413593 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
TMEM248-202ENST00000413593 DDX21Q9NR30 783 aaKnown RBP eCLIP13.07□□□□□ -0.32
TMEM248-202ENST00000413593 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
TMEM248-202ENST00000413593 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-202ENST00000413593 KCNA3P22001 575 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 XAGE3Q8WTP9 111 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-202ENST00000413593 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM248-202ENST00000413593 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
TMEM248-202ENST00000413593 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 CHRNA5P30532 468 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
TMEM248-202ENST00000413593 COPS6Q7L5N1 327 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
TMEM248-202ENST00000413593 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 KIAA1551Q9HCM1 1747 aa13.04□□□□□ -0.32
TMEM248-202ENST00000413593 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
TMEM248-202ENST00000413593 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
TMEM248-202ENST00000413593 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
TMEM248-202ENST00000413593 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
TMEM248-202ENST00000413593 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
TMEM248-202ENST00000413593 ZNF521Q96K83 1311 aa13.03□□□□□ -0.32
TMEM248-202ENST00000413593 NPHP1O15259 732 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 ST5P78524 1137 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 MIER1Q8N108 512 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
TMEM248-202ENST00000413593 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 GPTP24298 496 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 PDE6BP35913 854 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
TMEM248-202ENST00000413593 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
TMEM248-202ENST00000413593 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
TMEM248-202ENST00000413593 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
TMEM248-202ENST00000413593 H0YIN7 160 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 YY1P25490 414 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 GOLGA2Q08379 1002 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
TMEM248-202ENST00000413593 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 MYH16Q9H6N6 1097 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
TMEM248-202ENST00000413593 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-202ENST00000413593 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
TMEM248-202ENST00000413593 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
TMEM248-202ENST00000413593 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
TMEM248-202ENST00000413593 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
TMEM248-202ENST00000413593 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-202ENST00000413593 NTSR2O95665 410 aa12.98□□□□□ -0.33
TMEM248-202ENST00000413593 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-202ENST00000413593 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
TMEM248-202ENST00000413593 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
TMEM248-202ENST00000413593 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
TMEM248-202ENST00000413593 VAMP4O75379 141 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 SRGNP10124 158 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
TMEM248-202ENST00000413593 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-202ENST00000413593 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.33
TMEM248-202ENST00000413593 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
TMEM248-202ENST00000413593 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM248-202ENST00000413593 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
TMEM248-202ENST00000413593 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms