RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
TTC39A-208ENST00000413473 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.04■□□□□ 0.48
TTC39A-208ENST00000413473 PRAMEF22A3QJZ6 481 aa18.03■□□□□ 0.48
TTC39A-208ENST00000413473 ALDH1L1O75891 902 aa18.03■□□□□ 0.48
TTC39A-208ENST00000413473 CASTP20810 708 aaKnown RBP18.03■□□□□ 0.48
TTC39A-208ENST00000413473 PTH1RQ03431 593 aa18.03■□□□□ 0.48
TTC39A-208ENST00000413473 IFIT2P09913 472 aaKnown RBP18.02■□□□□ 0.48
TTC39A-208ENST00000413473 RUFY2Q8WXA3 655 aa18.02■□□□□ 0.48
TTC39A-208ENST00000413473 GCP02774 474 aa18.02■□□□□ 0.48
TTC39A-208ENST00000413473 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.48
TTC39A-208ENST00000413473 SYT1P21579 422 aa18.02■□□□□ 0.48
TTC39A-208ENST00000413473 XPCQ01831 940 aaPredicted RBP18.02■□□□□ 0.48
TTC39A-208ENST00000413473 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
TTC39A-208ENST00000413473 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.02■□□□□ 0.48
TTC39A-208ENST00000413473 STX6O43752 255 aa18.01■□□□□ 0.47
TTC39A-208ENST00000413473 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
TTC39A-208ENST00000413473 SMC3Q9UQE7 1217 aa18.01■□□□□ 0.47
TTC39A-208ENST00000413473 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
TTC39A-208ENST00000413473 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
TTC39A-208ENST00000413473 LARGE1O95461 756 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 AACSQ86V21 672 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 ERC1Q8IUD2 1116 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 GPATCH3Q96I76 525 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
TTC39A-208ENST00000413473 PXDNQ92626 1479 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 ZNF500O60304 480 aaPredicted RBP18■□□□□ 0.47
TTC39A-208ENST00000413473 DTNBO60941 627 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 PHF14O94880 888 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 TMEM87AQ8NBN3 555 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 ZKSCAN5Q9Y2L8 839 aa18■□□□□ 0.47
TTC39A-208ENST00000413473 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 TPM2P07951 284 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
TTC39A-208ENST00000413473 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.99■□□□□ 0.47
TTC39A-208ENST00000413473 EVI5LQ96CN4 794 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 ORAI2Q96SN7 254 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 PDRG1Q9NUG6 133 aa17.99■□□□□ 0.47
TTC39A-208ENST00000413473 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 CCDC83Q8IWF9 413 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 KAZALD1Q96I82 304 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 CCDC39Q9UFE4 941 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.98■□□□□ 0.47
TTC39A-208ENST00000413473 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
TTC39A-208ENST00000413473 GRM8O00222 908 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 F13A1P00488 732 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 VPS53Q5VIR6 699 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
TTC39A-208ENST00000413473 DDX54Q8TDD1 881 aaKnown RBP17.98■□□□□ 0.47
TTC39A-208ENST00000413473 CRYBG1Q9Y4K1 1723 aa17.97■□□□□ 0.47
TTC39A-208ENST00000413473 HSP90AA2PQ14568 343 aaPredicted RBP17.97■□□□□ 0.47
TTC39A-208ENST00000413473 EAF2Q96CJ1 260 aaPredicted RBP17.97■□□□□ 0.47
TTC39A-208ENST00000413473 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
TTC39A-208ENST00000413473 CYP46A1Q9Y6A2 500 aa17.97■□□□□ 0.47
TTC39A-208ENST00000413473 SASH1O94885 1247 aa17.97■□□□□ 0.47
TTC39A-208ENST00000413473 BICC1Q9H694 974 aaKnown RBP17.97■□□□□ 0.47
TTC39A-208ENST00000413473 GJB2P29033 226 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 G3BP1Q13283 466 aaKnown RBP eCLIP17.96■□□□□ 0.47
TTC39A-208ENST00000413473 NECTIN1Q15223 517 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 TM6SF1Q9BZW5 370 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
TTC39A-208ENST00000413473 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 CCDC183Q5T5S1 534 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 KCNB2Q92953 911 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
TTC39A-208ENST00000413473 NCAPD2Q15021 1401 aa17.96■□□□□ 0.46
TTC39A-208ENST00000413473 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.46
TTC39A-208ENST00000413473 FIBPO43427 364 aa17.95■□□□□ 0.46
TTC39A-208ENST00000413473 MCM5P33992 734 aa17.95■□□□□ 0.46
TTC39A-208ENST00000413473 UBE2HP62256 183 aa17.95■□□□□ 0.46
TTC39A-208ENST00000413473 DDX21Q9NR30 783 aaKnown RBP eCLIP17.95■□□□□ 0.46
TTC39A-208ENST00000413473 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
TTC39A-208ENST00000413473 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
TTC39A-208ENST00000413473 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
TTC39A-208ENST00000413473 RBM8AQ9Y5S9 174 aaKnown RBP17.95■□□□□ 0.46
TTC39A-208ENST00000413473 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 KCNJ4P48050 445 aa17.94■□□□□ 0.46
TTC39A-208ENST00000413473 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 NMIQ13287 307 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 SIL1Q9H173 461 aa17.94■□□□□ 0.46
TTC39A-208ENST00000413473 SH2B1Q9NRF2 756 aaPredicted RBP17.94■□□□□ 0.46
TTC39A-208ENST00000413473 MTMR6Q9Y217 621 aa17.94■□□□□ 0.46
TTC39A-208ENST00000413473 PTMAP06454 111 aaKnown RBP17.93■□□□□ 0.46
TTC39A-208ENST00000413473 PDIA6Q15084 440 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 ME3Q16798 604 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 CREB3L3Q68CJ9 461 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 UTYO14607 1347 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 NECAB1Q8N987 351 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
TTC39A-208ENST00000413473 TLR7Q9NYK1 1049 aaKnown RBP17.93■□□□□ 0.46
TTC39A-208ENST00000413473 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms