RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TRIM44Q96DX7 344 aaPredicted RBP15.86■□□□□ 0.13
LITAF-203ENST00000413364 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
LITAF-203ENST00000413364 AOX1Q06278 1338 aa15.86■□□□□ 0.13
LITAF-203ENST00000413364 PCDH11XQ9BZA7 1347 aa15.86■□□□□ 0.13
LITAF-203ENST00000413364 PCDH11YQ9BZA8 1340 aa15.86■□□□□ 0.13
LITAF-203ENST00000413364 ZCRB1Q8TBF4 217 aaKnown RBP15.85■□□□□ 0.13
LITAF-203ENST00000413364 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
LITAF-203ENST00000413364 C9orf78Q9NZ63 289 aaPredicted RBP15.85■□□□□ 0.13
LITAF-203ENST00000413364 TAF3Q5VWG9 929 aa15.85■□□□□ 0.13
LITAF-203ENST00000413364 CARD10Q9BWT7 1032 aa15.85■□□□□ 0.13
LITAF-203ENST00000413364 AIMP1Q12904 312 aaKnown RBP15.84■□□□□ 0.13
LITAF-203ENST00000413364 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
LITAF-203ENST00000413364 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
LITAF-203ENST00000413364 UTYO14607 1347 aa15.84■□□□□ 0.13
LITAF-203ENST00000413364 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
LITAF-203ENST00000413364 RHPN1Q8TCX5 695 aa15.84■□□□□ 0.13
LITAF-203ENST00000413364 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.13
LITAF-203ENST00000413364 LARP1Q6PKG0 1096 aaKnown RBP15.83■□□□□ 0.13
LITAF-203ENST00000413364 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.83■□□□□ 0.13
LITAF-203ENST00000413364 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.13
LITAF-203ENST00000413364 TMEM51Q9NW97 253 aa15.83■□□□□ 0.13
LITAF-203ENST00000413364 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
LITAF-203ENST00000413364 GRM8O00222 908 aa15.83■□□□□ 0.12
LITAF-203ENST00000413364 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.12
LITAF-203ENST00000413364 XAGE3Q8WTP9 111 aa15.83■□□□□ 0.12
LITAF-203ENST00000413364 USP16Q9Y5T5 823 aa15.83■□□□□ 0.12
LITAF-203ENST00000413364 REC8O95072 547 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 MYL6BP14649 208 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 IL2RBP14784 551 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 ERC2O15083 957 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
LITAF-203ENST00000413364 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
LITAF-203ENST00000413364 GLI3P10071 1580 aa15.81■□□□□ 0.12
LITAF-203ENST00000413364 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
LITAF-203ENST00000413364 TEX2Q8IWB9 1127 aa15.81■□□□□ 0.12
LITAF-203ENST00000413364 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
LITAF-203ENST00000413364 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
LITAF-203ENST00000413364 OFD1O75665 1012 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 NEXNQ0ZGT2 675 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 EVA1CP58658 441 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 RABEP1Q15276 862 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
LITAF-203ENST00000413364 STRN4Q9NRL3 753 aa15.8■□□□□ 0.12
LITAF-203ENST00000413364 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 CHMP5Q9NZZ3 219 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 LAMB4A4D0S4 1761 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 LETM1O95202 739 aaPredicted RBP15.79■□□□□ 0.12
LITAF-203ENST00000413364 ANKRD13DQ6ZTN6 518 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
LITAF-203ENST00000413364 ERBB4Q15303 1308 aa15.79■□□□□ 0.12
LITAF-203ENST00000413364 ANP32BQ92688 251 aaKnown RBP15.78■□□□□ 0.12
LITAF-203ENST00000413364 KAZALD1Q96I82 304 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 CD2BP2O95400 341 aaKnown RBP15.78■□□□□ 0.12
LITAF-203ENST00000413364 CHMLP26374 656 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 OS9Q13438 667 aaPredicted RBP15.78■□□□□ 0.12
LITAF-203ENST00000413364 GCKRQ14397 625 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 ESYT1Q9BSJ8 1104 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 FAM13BQ9NYF5 915 aa15.78■□□□□ 0.12
LITAF-203ENST00000413364 USP42Q9H9J4 1324 aaKnown RBP15.77■□□□□ 0.12
LITAF-203ENST00000413364 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.12
LITAF-203ENST00000413364 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.12
LITAF-203ENST00000413364 DDIT3P35638 169 aa15.77■□□□□ 0.12
LITAF-203ENST00000413364 RILPL2Q969X0 211 aa15.77■□□□□ 0.12
LITAF-203ENST00000413364 MYD88Q99836 296 aa15.77■□□□□ 0.12
LITAF-203ENST00000413364 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
LITAF-203ENST00000413364 PI4K2BQ8TCG2 481 aa15.77■□□□□ 0.11
LITAF-203ENST00000413364 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
LITAF-203ENST00000413364 CHRM1P11229 460 aaPredicted RBP15.76■□□□□ 0.11
LITAF-203ENST00000413364 UNC5CLQ8IV45 518 aa15.76■□□□□ 0.11
LITAF-203ENST00000413364 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
LITAF-203ENST00000413364 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
LITAF-203ENST00000413364 PIP4K2AP48426 406 aaPredicted RBP15.75■□□□□ 0.11
LITAF-203ENST00000413364 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
LITAF-203ENST00000413364 ZSCAN20P17040 1043 aaPredicted RBP15.75■□□□□ 0.11
LITAF-203ENST00000413364 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
LITAF-203ENST00000413364 PA2G4Q9UQ80 394 aaKnown RBP15.75■□□□□ 0.11
LITAF-203ENST00000413364 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
LITAF-203ENST00000413364 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
LITAF-203ENST00000413364 GRPEL1Q9HAV7 217 aa15.74■□□□□ 0.11
LITAF-203ENST00000413364 TTC41PQ6P2S7 1318 aa15.74■□□□□ 0.11
LITAF-203ENST00000413364 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
LITAF-203ENST00000413364 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
LITAF-203ENST00000413364 NBPF26B4DH59 902 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 NBPF14Q5TI25 921 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 NBPF10Q6P3W6 841 aaKnown RBP15.73■□□□□ 0.11
LITAF-203ENST00000413364 NBPF15Q8N660 670 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 ZNF830Q96NB3 372 aaPredicted RBP15.73■□□□□ 0.11
LITAF-203ENST00000413364 CCDC94Q9BW85 323 aaPredicted RBP15.73■□□□□ 0.11
LITAF-203ENST00000413364 COL15A1P39059 1388 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 DYNC1I1O14576 645 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms