RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 RGPD2P0DJD1 1756 aa22.86■■□□□ 1.25
TNFRSF8-202ENST00000413146 STX6O43752 255 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 CASTP20810 708 aaKnown RBP22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 AKAP4Q5JQC9 854 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 PTMAP06454 111 aaKnown RBP22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 MTX1Q13505 466 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 CSPP1Q1MSJ5 1256 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 DBF4Q9UBU7 674 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 CNPY2Q9Y2B0 182 aa22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 R3HCC1Q9Y3T6 440 aaKnown RBP22.85■■□□□ 1.25
TNFRSF8-202ENST00000413146 CCDC183Q5T5S1 534 aa22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 FAM184AQ8NB25 1140 aa22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 SYT1P21579 422 aa22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 LARP6Q9BRS8 491 aaKnown RBP22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 C9orf78Q9NZ63 289 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 ATP6V1DQ9Y5K8 247 aa22.84■■□□□ 1.25
TNFRSF8-202ENST00000413146 ECHDC1Q9NTX5 307 aa22.83■■□□□ 1.25
TNFRSF8-202ENST00000413146 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.24
TNFRSF8-202ENST00000413146 ADGRL3Q9HAR2 1447 aa22.83■■□□□ 1.24
TNFRSF8-202ENST00000413146 ALDH1L1O75891 902 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 F13A1P00488 732 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 MPRIPQ6WCQ1 1025 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 ERC1Q8IUD2 1116 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 HDAC5Q9UQL6 1122 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 IFIT2P09913 472 aaKnown RBP22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 UBE2HP62256 183 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 MAP3K2Q9Y2U5 619 aa22.82■■□□□ 1.24
TNFRSF8-202ENST00000413146 LETM1O95202 739 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 CPA1P15085 419 aa22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 UVSSAQ2YD98 709 aa22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 KCNH5Q8NCM2 988 aa22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 JAKMIP1Q96N16 626 aaKnown RBP22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 HYPKQ9NX55 129 aa22.81■■□□□ 1.24
TNFRSF8-202ENST00000413146 PHRF1Q9P1Y6 1649 aaKnown RBP22.8■■□□□ 1.24
TNFRSF8-202ENST00000413146 NCAPD2Q15021 1401 aa22.8■■□□□ 1.24
TNFRSF8-202ENST00000413146 VPS53Q5VIR6 699 aa22.8■■□□□ 1.24
TNFRSF8-202ENST00000413146 LRRC59Q96AG4 307 aaKnown RBP22.8■■□□□ 1.24
TNFRSF8-202ENST00000413146 PDRG1Q9NUG6 133 aa22.8■■□□□ 1.24
TNFRSF8-202ENST00000413146 PTH1RQ03431 593 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 C1orf141Q5JVX7 400 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 PRPF40BQ6NWY9 871 aaKnown RBP22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 LARGE1O95461 756 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 AMOTQ4VCS5 1084 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 CCDC83Q8IWF9 413 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 ZSCAN31Q96LW9 406 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 CYP46A1Q9Y6A2 500 aa22.79■■□□□ 1.24
TNFRSF8-202ENST00000413146 FIBPO43427 364 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 EVI5LQ96CN4 794 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 TM6SF1Q9BZW5 370 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 SH2B1Q9NRF2 756 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 RNMTO43148 476 aaKnown RBP22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 PSME1Q06323 249 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 TPRNQ4KMQ1 711 aa22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 PA2G4Q9UQ80 394 aaKnown RBP22.78■■□□□ 1.24
TNFRSF8-202ENST00000413146 GJB2P29033 226 aa22.77■■□□□ 1.24
TNFRSF8-202ENST00000413146 AACSQ86V21 672 aa22.77■■□□□ 1.24
TNFRSF8-202ENST00000413146 ADCK5Q3MIX3 580 aa22.77■■□□□ 1.24
TNFRSF8-202ENST00000413146 ZSWIM6Q9HCJ5 1215 aa22.77■■□□□ 1.24
TNFRSF8-202ENST00000413146 PXDNQ92626 1479 aa22.77■■□□□ 1.24
TNFRSF8-202ENST00000413146 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 CCDC171Q6TFL3 1326 aa22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 CHD2O14647 1828 aaKnown RBP22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 GIGYF1O75420 1035 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 ZKSCAN1P17029 563 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 KIAA2012Q0VF49 1180 aa22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 PROSER3Q2NL68 480 aa22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 CWF19L2Q2TBE0 894 aaKnown RBP22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 KCNB2Q92953 911 aa22.76■■□□□ 1.23
TNFRSF8-202ENST00000413146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.75■■□□□ 1.23
TNFRSF8-202ENST00000413146 PDCL3Q9H2J4 239 aa22.75■■□□□ 1.23
TNFRSF8-202ENST00000413146 USP25Q9UHP3 1055 aa22.75■■□□□ 1.23
TNFRSF8-202ENST00000413146 HIP1O00291 1037 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 MTMR6Q9Y217 621 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 UQCRHLA0A096LP55 91 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 UQCRHP07919 91 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 KCNJ4P48050 445 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 NECTIN1Q15223 517 aa22.74■■□□□ 1.23
TNFRSF8-202ENST00000413146 RBM8AQ9Y5S9 174 aaKnown RBP22.73■■□□□ 1.23
TNFRSF8-202ENST00000413146 GRM8O00222 908 aa22.72■■□□□ 1.23
TNFRSF8-202ENST00000413146 DNM1Q05193 864 aaKnown RBP22.72■■□□□ 1.23
TNFRSF8-202ENST00000413146 G3BP1Q13283 466 aaKnown RBP eCLIP22.72■■□□□ 1.23
TNFRSF8-202ENST00000413146 LINS1Q8NG48 757 aa22.72■■□□□ 1.23
TNFRSF8-202ENST00000413146 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 VPS37CA5D8V6 355 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 DDX58O95786 925 aaKnown RBP22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 CREB3L3Q68CJ9 461 aa22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 KLHL34Q8N239 644 aa22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 RBM33Q96EV2 1170 aaKnown RBP22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 SUCLG2Q96I99 432 aa22.71■■□□□ 1.23
TNFRSF8-202ENST00000413146 ME3Q16798 604 aa22.7■■□□□ 1.22
TNFRSF8-202ENST00000413146 SASS6Q6UVJ0 657 aa22.7■■□□□ 1.22
TNFRSF8-202ENST00000413146 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
TNFRSF8-202ENST00000413146 ADCY5O95622 1261 aa22.7■■□□□ 1.22
TNFRSF8-202ENST00000413146 NMIQ13287 307 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms