RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
ZNF3-204ENST00000412947 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 RGL2O15211 777 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 FKBP8Q14318 412 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 BCL2L12Q9HB09 334 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
ZNF3-204ENST00000412947 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
ZNF3-204ENST00000412947 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
ZNF3-204ENST00000412947 PHAXQ9H814 394 aaKnown RBP16.22■□□□□ 0.19
ZNF3-204ENST00000412947 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
ZNF3-204ENST00000412947 MMP10P09238 476 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 PTGER2P43116 358 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 HLFQ16534 295 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 PLBD2Q8NHP8 589 aa16.2■□□□□ 0.18
ZNF3-204ENST00000412947 FLIIQ13045 1269 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 NFIXQ14938 502 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 HSP90AB3PQ58FF7 597 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
ZNF3-204ENST00000412947 SSH1Q8WYL5 1049 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 PPP1R1BQ9UD71 204 aaPredicted RBP16.19■□□□□ 0.18
ZNF3-204ENST00000412947 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
ZNF3-204ENST00000412947 TM4SF1P30408 202 aa16.18■□□□□ 0.18
ZNF3-204ENST00000412947 FKBP5Q13451 457 aaPredicted RBP16.18■□□□□ 0.18
ZNF3-204ENST00000412947 G2E3Q7L622 706 aa16.18■□□□□ 0.18
ZNF3-204ENST00000412947 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
ZNF3-204ENST00000412947 SGIP1Q9BQI5 828 aa16.18■□□□□ 0.18
ZNF3-204ENST00000412947 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
ZNF3-204ENST00000412947 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
ZNF3-204ENST00000412947 COL24A1Q17RW2 1714 aa16.17■□□□□ 0.18
ZNF3-204ENST00000412947 CARMIL3Q8ND23 1372 aa16.17■□□□□ 0.18
ZNF3-204ENST00000412947 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
ZNF3-204ENST00000412947 LRP5O75197 1615 aa16.16■□□□□ 0.18
ZNF3-204ENST00000412947 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
ZNF3-204ENST00000412947 GPTP24298 496 aa16.16■□□□□ 0.18
ZNF3-204ENST00000412947 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
ZNF3-204ENST00000412947 DDR1Q08345 913 aa16.16■□□□□ 0.18
ZNF3-204ENST00000412947 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
ZNF3-204ENST00000412947 KSR2Q6VAB6 950 aa16.16■□□□□ 0.18
ZNF3-204ENST00000412947 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
ZNF3-204ENST00000412947 NPHP1O15259 732 aa16.15■□□□□ 0.18
ZNF3-204ENST00000412947 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
ZNF3-204ENST00000412947 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
ZNF3-204ENST00000412947 SERPINB2P05120 415 aa16.14■□□□□ 0.17
ZNF3-204ENST00000412947 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
ZNF3-204ENST00000412947 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
ZNF3-204ENST00000412947 PTPRCP08575 1304 aa16.14■□□□□ 0.17
ZNF3-204ENST00000412947 ADCY9O60503 1353 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 NEXNQ0ZGT2 675 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 PARP10Q53GL7 1025 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
ZNF3-204ENST00000412947 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 MYD88Q99836 296 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
ZNF3-204ENST00000412947 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
ZNF3-204ENST00000412947 NUP98P52948 1817 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
ZNF3-204ENST00000412947 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 DNAAF4Q8WXU2 420 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 NYXQ9GZU5 481 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
ZNF3-204ENST00000412947 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
ZNF3-204ENST00000412947 ST5P78524 1137 aa16.11■□□□□ 0.17
ZNF3-204ENST00000412947 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
ZNF3-204ENST00000412947 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
ZNF3-204ENST00000412947 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
ZNF3-204ENST00000412947 F6X3S4 739 aa16.1■□□□□ 0.17
ZNF3-204ENST00000412947 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
ZNF3-204ENST00000412947 NLRP10Q86W26 655 aa16.1■□□□□ 0.17
ZNF3-204ENST00000412947 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
ZNF3-204ENST00000412947 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
ZNF3-204ENST00000412947 ANKRD36CQ5JPF3 1778 aa16.1■□□□□ 0.17
ZNF3-204ENST00000412947 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
ZNF3-204ENST00000412947 BCAR3O75815 825 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
ZNF3-204ENST00000412947 PRR5LQ6MZQ0 368 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 SLC4A10Q6U841 1118 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
ZNF3-204ENST00000412947 FHDC1Q9C0D6 1143 aaPredicted RBP16.09■□□□□ 0.17
ZNF3-204ENST00000412947 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 CD2APQ9Y5K6 639 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
ZNF3-204ENST00000412947 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
ZNF3-204ENST00000412947 FRAT1Q92837 279 aaPredicted RBP16.08■□□□□ 0.16
ZNF3-204ENST00000412947 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
ZNF3-204ENST00000412947 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
ZNF3-204ENST00000412947 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.16
ZNF3-204ENST00000412947 NTSR2O95665 410 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms