RNA–Protein interactions for RNA: ENST00000412853.1

CTTNBP2-202, Transcript of cortactin binding protein 2, humanhuman

TSL 4

Gene CTTNBP2, Length 470 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-202ENST00000412853 MASTLQ96GX5 879 aa15.25■□□□□ 0.03
CTTNBP2-202ENST00000412853 FOXN1O15353 648 aa15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 CCDC93Q567U6 631 aa15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
CTTNBP2-202ENST00000412853 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
CTTNBP2-202ENST00000412853 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
CTTNBP2-202ENST00000412853 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
CTTNBP2-202ENST00000412853 A1BGP04217 495 aa15.22■□□□□ 0.03
CTTNBP2-202ENST00000412853 SRGNP10124 158 aa15.22■□□□□ 0.03
CTTNBP2-202ENST00000412853 COL11A2P13942 1736 aaPredicted RBP15.22■□□□□ 0.03
CTTNBP2-202ENST00000412853 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
CTTNBP2-202ENST00000412853 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 CACNA1SQ13698 1873 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 FER1L6Q2WGJ9 1857 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 BTBD11A6QL63 1104 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 GTF2E1P29083 439 aaPredicted RBP15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 HACL1Q9UJ83 578 aa15.21■□□□□ 0.03
CTTNBP2-202ENST00000412853 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 CAMTA2O94983 1202 aa15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 NPR1P16066 1061 aa15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 VEGFBP49765 207 aa15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 ZNF277Q9NRM2 450 aaPredicted RBP15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 ABT1Q9ULW3 272 aaKnown RBP15.2■□□□□ 0.02
CTTNBP2-202ENST00000412853 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
CTTNBP2-202ENST00000412853 FKBP4Q02790 459 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTTNBP2-202ENST00000412853 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
CTTNBP2-202ENST00000412853 PER1O15534 1290 aaPredicted RBP15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 EPHX2P34913 555 aa15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 LBX1P52954 281 aa15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 RTKN2Q8IZC4 609 aa15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
CTTNBP2-202ENST00000412853 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 LMOD1P29536 600 aaPredicted RBP15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 DEFB115Q30KQ5 88 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
CTTNBP2-202ENST00000412853 SCN4AP35499 1836 aa15.16■□□□□ 0.02
CTTNBP2-202ENST00000412853 GRM1Q13255 1194 aa15.16■□□□□ 0.02
CTTNBP2-202ENST00000412853 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
CTTNBP2-202ENST00000412853 CFAP53Q96M91 514 aa15.16■□□□□ 0.02
CTTNBP2-202ENST00000412853 ALDH1B1P30837 517 aa15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 MAP1SQ66K74 1059 aaPredicted RBP15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 CNTROBQ8N137 903 aa15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 GJA3Q9Y6H8 435 aa15.15■□□□□ 0.02
CTTNBP2-202ENST00000412853 KCNQ3O43525 872 aa15.14■□□□□ 0.01
CTTNBP2-202ENST00000412853 SNRPA1P09661 255 aaKnown RBP15.14■□□□□ 0.01
CTTNBP2-202ENST00000412853 SYNE4Q8N205 404 aa15.14■□□□□ 0.01
CTTNBP2-202ENST00000412853 WBP1LQ9NX94 342 aa15.14■□□□□ 0.01
CTTNBP2-202ENST00000412853 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
CTTNBP2-202ENST00000412853 ITGBL1O95965 494 aaPredicted RBP15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 NUDCQ9Y266 331 aa15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 WDR33Q9C0J8 1336 aaKnown RBP15.13■□□□□ 0.01
CTTNBP2-202ENST00000412853 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
CTTNBP2-202ENST00000412853 GPC2Q8N158 579 aa15.12■□□□□ 0.01
CTTNBP2-202ENST00000412853 RPGRQ92834 1020 aaKnown RBP15.12■□□□□ 0.01
CTTNBP2-202ENST00000412853 TMX4Q9H1E5 349 aaPredicted RBP15.12■□□□□ 0.01
CTTNBP2-202ENST00000412853 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
CTTNBP2-202ENST00000412853 RASSF10A6NK89 507 aa15.11■□□□□ 0.01
CTTNBP2-202ENST00000412853 C7orf43Q8WVR3 580 aa15.11■□□□□ 0.01
CTTNBP2-202ENST00000412853 ABHD8Q96I13 439 aa15.11■□□□□ 0.01
CTTNBP2-202ENST00000412853 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
CTTNBP2-202ENST00000412853 PRAMEF22A3QJZ6 481 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 ECE1P42892 770 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 FAM161AQ3B820 660 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 NGEFQ8N5V2 710 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
CTTNBP2-202ENST00000412853 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 CCDC85CA6NKD9 419 aa15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 FZD9O00144 591 aa15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 MCM10Q7L590 875 aa15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 LARGE2Q8N3Y3 721 aa15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTTNBP2-202ENST00000412853 NEFMP07197 916 aa15.08■□□□□ 0
CTTNBP2-202ENST00000412853 KIF6Q6ZMV9 814 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms