RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LONRF3Q496Y0 759 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 AKNAD1Q5T1N1 836 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 SMARCE1Q969G3 411 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 CLUAP1Q96AJ1 413 aa6.15□□□□□ -1.42
HERC4-205ENST00000412272 EIF3CQ99613 913 aaKnown RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 A1CFQ9NQ94 594 aaKnown RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 GNL3LQ9NVN8 582 aaKnown RBP6.15□□□□□ -1.42
HERC4-205ENST00000412272 SMARCA5O60264 1052 aaPredicted RBP6.15□□□□□ -1.43
HERC4-205ENST00000412272 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.433e-7■■■■□ 26
HERC4-205ENST00000412272 U2AF1L5P0DN76 240 aaPredicted RBP6.15□□□□□ -1.43
HERC4-205ENST00000412272 ZNF24P17028 368 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 ELF1P32519 619 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 ST5P78524 1137 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 ZBED6P86452 979 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 U2AF1Q01081 240 aaKnown RBP eCLIP6.15□□□□□ -1.435e-7■■■■□ 20.1
HERC4-205ENST00000412272 GOLGA2Q08379 1002 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 HSP90AB2PQ58FF8 381 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 TTC30AQ86WT1 665 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 PNMA2Q9UL42 364 aa6.15□□□□□ -1.43
HERC4-205ENST00000412272 EIF2AK4Q9P2K8 1649 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 PRIM1P49642 420 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 RAB27AP51159 221 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 MCM6Q14566 821 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 TRIM6Q9C030 488 aaPredicted RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 IQCGQ9H095 443 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 TMOD4Q9NZQ9 345 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 MAGI3Q5TCQ9 1506 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 PBRM1Q86U86 1689 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 PECAM1P16284 738 aaPredicted RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 CORO7P57737 925 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 SF3B2Q13435 895 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 SLFNL1Q499Z3 407 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 SMCR8Q8TEV9 937 aaPredicted RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 BICD1Q96G01 975 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 SPATS2LQ9NUQ6 558 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 UTP6Q9NYH9 597 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 MCM8Q9UJA3 840 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 AKAP2Q9Y2D5 859 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 HMGXB3Q12766 1538 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 FLT3P36888 993 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 SFMBT2Q5VUG0 894 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 C3orf20Q8ND61 904 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 IQSEC3Q9UPP2 1182 aaPredicted RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 ANKRD50Q9ULJ7 1429 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 NESP48681 1621 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 LRRC10BA6NIK2 292 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 CPLX2Q6PUV4 134 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 CLEC4GQ6UXB4 293 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 TMX4Q9H1E5 349 aaPredicted RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 TMEM165Q9HC07 324 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 LMBRD1Q9NUN5 540 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 PUF60Q9UHX1 559 aaKnown RBP6.14□□□□□ -1.43
HERC4-205ENST00000412272 FHOD1Q9Y613 1164 aa6.14□□□□□ -1.43
HERC4-205ENST00000412272 ATP10AO60312 1499 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 BAG4O95429 457 aaKnown RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 MYL1P05976 194 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 PLA2G4AP47712 749 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 EIF5P55010 431 aaKnown RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 RBBP5Q15291 538 aaKnown RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 E2F5Q15329 346 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 STAG2Q8N3U4 1231 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 RNF214Q8ND24 703 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 ARMC2Q8NEN0 867 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 RETREG1Q9H6L5 497 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 ATAD2Q6PL18 1390 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 ANKRD36BQ8N2N9 1353 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 H7C1W4 665 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 TIMM44O43615 452 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 MAGEA10P43363 369 aaPredicted RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 CRYMQ14894 314 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 PKN1Q16512 942 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 FBXO38Q6PIJ6 1188 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 NYAP1Q6ZVC0 841 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 TAF4BQ92750 862 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 UBXN6Q9BZV1 441 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 TBC1D7Q9P0N9 293 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 PRPHP41219 470 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 DUSP9Q99956 384 aaKnown RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 G3BP2Q9UN86 482 aaKnown RBP6.13□□□□□ -1.43
HERC4-205ENST00000412272 EXOC6BQ9Y2D4 811 aa6.13□□□□□ -1.43
HERC4-205ENST00000412272 TPP2P29144 1249 aaPredicted RBP6.12□□□□□ -1.43
HERC4-205ENST00000412272 PEX19P40855 299 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 HSP90B2PQ58FF3 399 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 TTLL5Q6EMB2 1281 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 REXO1L1PQ8IX06 675 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 RBM17Q96I25 401 aaKnown RBP6.12□□□□□ -1.43
HERC4-205ENST00000412272 CTDP1Q9Y5B0 961 aaPredicted RBP6.12□□□□□ -1.43
HERC4-205ENST00000412272 PLEKHO1Q53GL0 409 aaPredicted RBP6.12□□□□□ -1.43
HERC4-205ENST00000412272 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 KIAA1524Q8TCG1 905 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 ABCF2Q9UG63 623 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 CARMIL1Q5VZK9 1371 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 PPRC1Q5VV67 1664 aaKnown RBP6.12□□□□□ -1.43
HERC4-205ENST00000412272 DAPK1P53355 1430 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 BICRAQ9NZM4 1560 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 KAT2BQ92831 832 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms